|
Name : prpR (Rmet_1588) Accession : YP_583740.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : propionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1711364 - 1713265 bp Length : 1902 bp Strand : + Note : - DNA sequence : ATGGGCATCAGCCGTCTCTCTCGCGCCTTTGCCGAACTGATTCCGGCCTACGCGGGCCGGGCGGAATTCCGGATCGTTGG CCGGGCCTTCGAAGCCGCGGCCAGCGCCATCAACCGGGAGGCACGGGAGAACCGCGTCGATGTGGTGGTGGCGGGCGGAT CGAACGGCGCCTACCTGCGCCAGCATGTCGACGTGCCGGTGGTGCTGGTCAAGGTGACCGGCTTCGACGTCATGAGCGCG TTAGCCACCGCCCGGCGCATTTCGCCGAAGGTGGCGCTGGTGACGCATGCCTCCACCTACGCCGAGGTCGACGAGTTTGT ACGGGCCTTCTCGCTCGATATCCCGCGCTACACCTATCTGACTGAAGACGATGCGACCGCACGTGTACGGGCGCTCAAGG AGGAGGGCGTGCGCGTGGTGGTCGGCCCGGGCCTGGTGACAGACATGGCCGACAAGTACGGGCTCGTCGGCGTGTTTCTC TACTCGGGCAATGCCGTGCGGCTGGCGCTGGAGGATGCAATCGAGGCCGCGCGGTTGCGTCGTATCGAATCCACGCGACG CGAATACGTGAACACGATTCTTGCCCACCTGAACGAAGGCGTGGCTGCGGTAGACGGCGAGGGGCGGGTGCAGGCGTTCA ATCCGGCGATGGAGCGATTCCTCGGCACGCCTGCCGGGGTTGCGGTGGGTCGCAAGCTATCCACGCTGGCGCCCGGACTG TCCCTCGACGGCGTGATGCAGAGCGGCGCGCGCGAGCTCGAAGCAATCCATCGGTTGGGCGACAAGATGGTGGTCGTCAA CCGGATTCCGATCATGAGCGAGGCCGGCACGACAGGCGCCGTGCTGACGATCCAGGACGCCAACGCGATTCACCGCGCGG ACCGCAACCTGCGCTCGCGCACACGCGCCCGGGCGGCGGGCGTGCGTTACAGCCTGGACGACCTGGCGGGCGATTCGCCG GCGATGAGCGATCTGCGTGCGCTGGCGCGGCGCTATGCGATGGTCGATTCGACCGTTCTGGTCAGCGGCGAAAGCGGTAC CGGCAAGGAAGTGCTGGCGCAGGGGATGCACGACGCGAGTCCGCGCCGCGCCTTTCCCTTCGTGGCGGTCAACTGCGCGG CCTTCCCCGAGACGCTGCTCGAGTCCGAGCTGTTCGGCTACGAGGAAGGGGCGTTCACGGGCGCCCGGCGTGGCGGCAAG GCCGGCCTGTTCGAGTCGGCGCATAACGGCACGCTGTTTCTCGACGAGATCGGCGATATGCCGCCGGCGCTGCAAACGCG CCTGCTGCGTGTGCTGCAGGAGAAACAGGTGCTGCCAATCGGCGCGATCGAGGCCGTGCCGGTCAATGTGCGCGTGATCG CCGCCACGCACCGCGACCTGGCCGCGCTCGTGCGCGATGGGGCATTCCGCCAGGATCTCTACTACCGCCTGAACATCCTC CGCATCGAGATGCCGCCTTTGCGCGACCGCGCGGGAGACCTGCCCGTGCTGGCGGAACTGCTCTACCGGCGTGCGCAGGA ACGGCTTGGCATGTCGGATGGGGAACCGCTACCCGCGATCGTGCGGGCACGCCTGGCGCGTTACGTGTGGCCGGGGAATA TTCGCGAACTCGAAAACGTGACCGAGCGGATTGCAGTGCTTGTGGCCGGCGCGAACCTGACACCTGTGGCGCTGCAGCGG GAGTTGCAGGCGGCGGTGCCGGAACTGTTTTCTGGTGATCACGGGACGGCCATCGAAATGTCCGACGGCGTGCCCGCGCA ATCGCTGGCAGGGGTGGCCAAGGCAAGCCAGGCCGAGCATATCCGCCGTGTGCTGGCCGATTGCGGCGGTAACCGCGCGG CGGCCTGCGCGCAGCTAGGCATCAGTCCGACAACACTTTGGAGACGGTTGCGCGAGGAGTGA Protein sequence : MGISRLSRAFAELIPAYAGRAEFRIVGRAFEAAASAINREARENRVDVVVAGGSNGAYLRQHVDVPVVLVKVTGFDVMSA LATARRISPKVALVTHASTYAEVDEFVRAFSLDIPRYTYLTEDDATARVRALKEEGVRVVVGPGLVTDMADKYGLVGVFL YSGNAVRLALEDAIEAARLRRIESTRREYVNTILAHLNEGVAAVDGEGRVQAFNPAMERFLGTPAGVAVGRKLSTLAPGL SLDGVMQSGARELEAIHRLGDKMVVVNRIPIMSEAGTTGAVLTIQDANAIHRADRNLRSRTRARAAGVRYSLDDLAGDSP AMSDLRALARRYAMVDSTVLVSGESGTGKEVLAQGMHDASPRRAFPFVAVNCAAFPETLLESELFGYEEGAFTGARRGGK AGLFESAHNGTLFLDEIGDMPPALQTRLLRVLQEKQVLPIGAIEAVPVNVRVIAATHRDLAALVRDGAFRQDLYYRLNIL RIEMPPLRDRAGDLPVLAELLYRRAQERLGMSDGEPLPAIVRARLARYVWPGNIRELENVTERIAVLVAGANLTPVALQR ELQAAVPELFSGDHGTAIEMSDGVPAQSLAGVAKASQAEHIRRVLADCGGNRAAACAQLGISPTTLWRRLREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 4e-123 | 43 |
