Gene Information

Name : traR (Rmet_1546)
Accession : YP_583698.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1668624 - 1669604 bp
Length : 981 bp
Strand : +
Note : -

DNA sequence : 
ATGACCTCAGGGCGCGATTCCCTACGGCGGGCTTGTATGGATCTTAGGCATTTTAGGTACTTTATTGCCGTAGCCGAAGA
GCTGCATTTTGCCCGTGCCGCGGAAAGACTGCATATCGAGCAATCGCCGCTATCGCGAGCCATAAAAGAACTAGAAGAAG
AGTTGGGGGTGACACTCTTCTCACGTACCACGCGCAGCACTAGATTGACTCGCGCGGGTCAACTTTTTTTGGAGAGCGCA
TACAGGGTGATGGCTGCCTTTCAACAAGCCCAGGACAGTGTCAAGGCTGTCGCCAACGGCTTCCAGGGACAACTGCGCAT
TGCGTTATCGGATGGCATCACACCGTCGCGTCTACCGATATTGCTTGCGCTCTGTCGGCAAGAAGAGCCGGAAATTGAAC
TCCGGTTTTTTGAGGTGACGCTTTCGCAACAGATAAAAGGCCTTCAAGATGATTTGTATGACGTCGGCTTCGCGCAGTCC
GATGAAGTCGGCGATGGAATTGTGGCAATACCTGTGTGGAGCGATGCGCTTATGGTGGCAGTGCCGGCCCGACACCCACT
TCTGGCTCACAAGCGAATACCTTTGGATGAGCTATTGCGCTATCCGTTGGTCCTCTGCGATCCGCAGATCTGCGAAGGTC
ACGCAAAGCACGTTGATAGAGTGTTACGTCAGGCAGACATGGAGCCGCTGATTGCTGAACGAGTTGCTACTGGCAATTTA
ATGATGGCGCTGGTATCGGCTGGCTTTGCGTTAGCACTGACGGGCGCGACTCATATTGCTGCGAGCCGTGAACCAGGTGT
CGTAGCACGACCACTGGCTTCGCGCGTGCCACCATTGACGACCTACCTGCTTCACACCGAAGGCGAACCCTCAGATGTAT
TGGCTCGCTTTATTGAGCGCGTGCAAGCCATCGAAGTACCTGATACCCCTCGATCCGCAATGGGCCACCGCCCCAATCCA
CCCGAGGAAGCTGTGCCATGA

Protein sequence : 
MTSGRDSLRRACMDLRHFRYFIAVAEELHFARAAERLHIEQSPLSRAIKELEEELGVTLFSRTTRSTRLTRAGQLFLESA
YRVMAAFQQAQDSVKAVANGFQGQLRIALSDGITPSRLPILLALCRQEEPEIELRFFEVTLSQQIKGLQDDLYDVGFAQS
DEVGDGIVAIPVWSDALMVAVPARHPLLAHKRIPLDELLRYPLVLCDPQICEGHAKHVDRVLRQADMEPLIAERVATGNL
MMALVSAGFALALTGATHIAASREPGVVARPLASRVPPLTTYLLHTEGEPSDVLARFIERVQAIEVPDTPRSAMGHRPNP
PEEAVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 5e-68 51
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 2e-50 42