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Name : yupB (Rmet_1477) Accession : YP_583629.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Virulence Product : F plasmid protein 32-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 1596748 - 1597578 bp Length : 831 bp Strand : + Note : - DNA sequence : ATGCAACTCGCATCCCGTTTCGCTTCCCGTTCCCCCTCGCTGCGCAGCGATTACCCGCTGTCCGATGACCAGATTCGCAG GGTGGCCCCGTCCATCTTCGCCGATGCACCGCATGAGAGCCGTTCCGAGCGGTACAGCTATATCCCCACCGCCGCCGTGC TGACCGAGCTTCGCAAAGAAGGCTTCCAGCCCTTCATGGTGACGCAGACCCGCGTGCGCGATGAAGGCAAGCGCGAGCAC ACCAAACACATGCTGCGCCTGCGCCATGCCAGTCAGATCAATGGCGCAGAGGCTAACGAAATCGTGCTGCTGAACTCGCA CGACGGCACGAGCAGCTATCAGATGCTGGCCGGAATGTTCCGCTTCGTGTGCAGCAATGGCCTTGTATGCGGCGACACCG TGGCCGATGTGCGCGTACCCCACAAAGGCGACGTGGCCGGTTCCGTCATCGAAGGCGCTTTCGAGGTGTTGAGCGGCTTC GAGCGGGTGAAGGAATCTCGCGATGCCATGCGCGCGATCACGCTGGATGAAGGCGAAGCCGAAGTGTTCGCCCGTTCCGC GCTGGCCCTCAAGTACGACCCCACGAACAACAAGCCCGCGCCCATCACCGAATCGCAAATCCTGATGCCGCGTCGGTTCG ATGACAGCCGCCCCGACCTGTGGAGCGTGTTCAACCGCACGCAGGAGAACTTGACCAAGGGCGGATTGCATGGCCGCAGC GCCAACGGACGTCGCCAGCAGACCCGACCCGTGCAGGGCATTGATTCCGATGTGCGCCTCAATCGCGCCCTCTGGATGCT GGCCGATGGCCTGCGCCAGTTGAAAGCCTGA Protein sequence : MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREH TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGF ERVKESRDAMRAITLDEGEAEVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG86 | AAN62307.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-105 | 81 |
| ORF C80 | AAN62174.1 | conserved hypothetical protein; associated with oriT region on plasmids | Not tested | PAGI-2(C) | Protein | 9e-104 | 77 |
| c5156 | NP_757004.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 3e-70 | 53 |
| ORF_47 | AAZ04456.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-70 | 53 |
| yafZ | YP_854321.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 3e-70 | 53 |
| unnamed | CAI43843.1 | hypothetical protein | Not tested | LEE | Protein | 8e-71 | 53 |
| S3199 | NP_838482.1 | hypothetical protein | Not tested | SHI-1 | Protein | 6e-71 | 53 |
| aec71 | AAW51754.1 | Aec71 | Not tested | AGI-3 | Protein | 8e-71 | 53 |
| SF2994 | NP_708768.1 | hypothetical protein | Not tested | SHI-1 | Protein | 6e-71 | 53 |
| ECO103_3587 | YP_003223444.1 | hypothetical protein | Not tested | LEE | Protein | 5e-71 | 53 |
| yafZ | ADD91704.1 | YafZ | Not tested | PAI-I AL862 | Protein | 8e-71 | 53 |
| Z1215 | NP_286750.1 | hypothetical protein | Not tested | TAI | Protein | 2e-71 | 53 |
| z1215 | CAD33785.1 | Z1215 protein | Not tested | PAI I 536 | Protein | 2e-71 | 53 |
| Z1655 | NP_287158.1 | hypothetical protein | Not tested | TAI | Protein | 2e-71 | 53 |
| yafZ | CAE85199.1 | YafZ protein | Not tested | PAI V 536 | Protein | 2e-73 | 53 |
| unnamed | CAD66201.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 7e-70 | 53 |
| unnamed | CAD42096.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 4e-70 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yupB | YP_583629.1 | F plasmid protein 32-like protein | VFG1526 | Protein | 1e-71 | 53 |
| yupB | YP_583629.1 | F plasmid protein 32-like protein | VFG1676 | Protein | 4e-70 | 53 |
| yupB | YP_583629.1 | F plasmid protein 32-like protein | VFG0658 | Protein | 2e-71 | 53 |
| yupB | YP_583629.1 | F plasmid protein 32-like protein | VFG1615 | Protein | 2e-70 | 52 |
