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Name : tnpA (Rmet_1264) Accession : YP_583418.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Unknown Product : transposase (DDE site) ISRme20 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1385440 - 1386450 bp Length : 1011 bp Strand : - Note : - DNA sequence : GTGGAAATACGTGTGTTGGCCCGCCAAGGATTAGGAATCCGGGAGATCTCGCGGGAACTGGGGCTGTCGAGGAACACCGT GCGCAAATACTTACGCAGTTGTGCTGAGCAGGATCGTGCGCCGCGATCGGGGCGCACGCAGAAGCTCGATCCGTTCAAAA CCTATCTGCATGACCGGGTTCGCGCAGCGCATCCGGCCTGGCTGCCGGCGACCGCGCTGCTGATCGAGATTCGCGCGATG GGTTATGACGGAGGCCTGACGCGGCTGCGGGTCTATCTGCGGTCGCTGAAGTCGATCAAGGCGCCGGAGCCACTGGTACG TTTCGAAACCGATCCGGGGCAGCAGATGCAGGTCGACTGGATCGTGTTTCGACGTGGCAAGCTGCCGCTGTCGGCATTCG TTGCGACGCTCGGTTACAGTCGGGCGAGTTACGTCGAGTTCGTGACCGACGAACGATTGCCGACGCTGCTGGGATGCCAT GAGCGCGCGTTCGACTTCTTCGGTGGGGTTCCTCGCGAGGTCCTGTACGACAACGTCAAGACGGTGGTGATTGGCCGAGA CGCCTATGGTCCCGGACTGCATCGCTATCAACCGGCCTTCCTCGACTTTGCGAAGCACCACGGCTTCGTGCCGCGCCTGT GCAAGCCCTACCGAGCGAAGACCAAGGGGAAGGTTGAGCGCTTCAACGGATACCTGCGCCGCAGCTTCTACAATCCGCTG GCAAGCCGGCTCGCTCAGGATCGCCTCTCGCTTGACGCGACCACGGCGAACGCCGAGGTCGTGCGCTGGCTGAGAGATGT CGCCAATGTGCGCATCCACGGCACGACTGGACAGTCGCCGCTCGAGCGTCTCCTGCTTGAGCAACCGAAGCTGCAGCAGT TGCCGGAGCCGTGGCGCGCGAACCTGCCGTCAGCTTCCGTGCCGACGATGCCACCGCCGTCGCGGTTCGATGATACGCCG CTGCAGCATCAGCTGTCAGTGTATCAAGCCCTGCTGACGGAGGCACGTTGA Protein sequence : MEIRVLARQGLGIREISRELGLSRNTVRKYLRSCAEQDRAPRSGRTQKLDPFKTYLHDRVRAAHPAWLPATALLIEIRAM GYDGGLTRLRVYLRSLKSIKAPEPLVRFETDPGQQMQVDWIVFRRGKLPLSAFVATLGYSRASYVEFVTDERLPTLLGCH ERAFDFFGGVPREVLYDNVKTVVIGRDAYGPGLHRYQPAFLDFAKHHGFVPRLCKPYRAKTKGKVERFNGYLRRSFYNPL ASRLAQDRLSLDATTANAEVVRWLRDVANVRIHGTTGQSPLERLLLEQPKLQQLPEPWRANLPSASVPTMPPPSRFDDTP LQHQLSVYQALLTEAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 2e-71 | 54 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 3e-71 | 54 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 2e-71 | 54 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 3e-71 | 54 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 3e-71 | 54 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 2e-71 | 54 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 2e-71 | 54 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 2e-71 | 54 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 2e-71 | 54 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 3e-71 | 54 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 3e-71 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | YP_583418.1 | transposase (DDE site) ISRme20 | VFG1607 | Protein | 1e-71 | 54 |
| tnpA | YP_583418.1 | transposase (DDE site) ISRme20 | VFG1514 | Protein | 1e-71 | 54 |
| tnpA | YP_583418.1 | transposase (DDE site) ISRme20 | VFG1626 | Protein | 1e-71 | 54 |
| tnpA | YP_583418.1 | transposase (DDE site) ISRme20 | VFG1461 | Protein | 2e-71 | 50 |
