Gene Information

Name : lolD (Rmet_1041)
Accession : YP_583196.1
Strain : Cupriavidus metallidurans CH34
Genome accession: NC_007973
Putative virulence/resistance : Resistance
Product : outer membrane-specific lipoprotein ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1131465 - 1132214 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGATACGACGCTGCTCCCCGAAGCCTCATTCCAGGCCGGCACCCAAGGCCCTGGCACGCCAACCGGCACGCCGGT
CCTGCTGGGCGAGGGCCTGACCAAGCGTTTCAAACAGGGCGGCCTGGACGTCGAAGTCCTGCGTGGCGTCGATGTGCGCG
TTGACGCTGGCGAGAAGGTGGCCATCGTCGGTGCTTCCGGTTCGGGCAAATCGACACTGCTGCACGTGCTGGGCGGGCTC
GACAACCCCGACGCCGGCCGCGTGGCGCTGCTGGGCAAGCCGTTCACGGCGCTGCGCGAGAAGCAGCGCAATATCGTGCG
CAACCGCTCGCTGGGCTTCGTCTATCAGTTTCACCATCTGCTGCCGGAGTTTACGGCGCTCGACAACGTGGCGATGCCAA
TGCGCATCCGCGGCCTGAGCGAGCCCGCCGCGCGCGCCGAGGCGCAGGCCGTTCTTGAGCGCGTGGGGCTTGGCGGCCGC
TCGAAGCACCGCCCCGGCGAACTCTCGGGCGGCGAGCGCCAGCGCGTGGCAATTGCCCGCGCGCTGGTCGGAAAGCCGGC
CTGCGTGCTGGCCGACGAGCCGACCGGCAACCTTGACGACCACACGGCAGGCGGCGTGTACGACCTGATGCTGGAGCTGT
CACGCACGCTGGGCACGAGCTTCGTGATCGTCACCCACGACCTCGACCTGGCTGGCCGTTGCGACCGCGTGCTGCGGCTG
CGCGACGGTCACTTGCATCAAGAGCGTTGA

Protein sequence : 
MSDTTLLPEASFQAGTQGPGTPTGTPVLLGEGLTKRFKQGGLDVEVLRGVDVRVDAGEKVAIVGASGSGKSTLLHVLGGL
DNPDAGRVALLGKPFTALREKQRNIVRNRSLGFVYQFHHLLPEFTALDNVAMPMRIRGLSEPAARAEAQAVLERVGLGGR
SKHRPGELSGGERQRVAIARALVGKPACVLADEPTGNLDDHTAGGVYDLMLELSRTLGTSFVIVTHDLDLAGRCDRVLRL
RDGHLHQER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_583196.1 outer membrane-specific lipoprotein ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-35 48
lolD YP_583196.1 outer membrane-specific lipoprotein ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 44