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Name : lysS (Rmet_1034) Accession : YP_583189.1 Strain : Cupriavidus metallidurans CH34 Genome accession: NC_007973 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1122634 - 1124181 bp Length : 1548 bp Strand : - Note : - DNA sequence : ATGACCGAACCGACCCGCGCCCAAGCCGCCACGCCCACCACCGAAGGGCTTGCCGTAGATGAGAACAAGATCATCGCCGA GCGGCGCGAGAAACTGCAGGCCCTGCGCCAGCAAGGCGTGGCCTTCCCCAACGATTTCCAGCCGACGCACCAGGCCGGCG CGCTGCACGCGCAGTATGGCGAAACGGACCAGGCCACGCTGGAAGCCAGCCCCGTGGAAGTGTCCATCGCCGGACGCATG ATGCTCAAGCGCGTGATGGGCAAGGCCAGCTTCGCCACGGTCCAGGACGGCAGCGGCCAGATCCAGTTCTACATCACGCG CGACAAGGTCGGTGAAGACGTCTATGCCGCGTTCAAGCACTGGGACCTCGGCGACATCATCAGCGCGCGCGGAGAACTGT TCCGCACGAACAAGGGCGAGTTGTCGGTGCAGGTGCGCGAACTGCGCCTGCTGTCGAAGGCACTGCGTCCCCTGCCGGAC AAGTTCCATGGCCTGGCCGACCAGGAAACCAAATACCGCCAGCGCTATGTGGACCTGATCGTCTCGCCGGAAACGCGCAG CACGTTCCGCGCCCGCACCCAGGCCATCTCGTCGATCCGCCGCCATATGGCCGATGCCGGCTTTATGGAAGTGGAAACGC CGATGCTGCACCCGATTCCGGGTGGCGCGGCGGCCAAGCCGTTCATCACGCACCACAACGCACTGGACATGCAGATGTTC ATGCGCATCGCGCCCGAGCTCTATCTGAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAAATCAACCGCAACTT CCGTAACGAAGGGGTGAGCCCGCGCCACAACCCCGAGTTCACGATGATGGAGTTCTACGCGGCCTACACGGATTACCGTT GGCTGATGGACTTCACCGAGAACCTGATCCGTCAGGCCGCAATTGACGCGCGTGGCAGCGCCACGGTGACGTACCAGGGC CGCGAACTTGATCTGTCCAAGCCGTTCCATCGCCTGACGATCTGCGGGGCGATCCAGAAGTACGCGCCGGAATACACCGA CGCGCAGCTTGCCGATGCCGACTTCCTGCGCGCCGAGCTCAAGAACAAGTTCAAGATCAATACCAGCGCGCCGCAGTTCC TGAACGCCGGCCTGGGCACGCTGCAACTGGTGCTCTTCGAGGAAACCGCCGAAGCGCAACTCTGGGAACCGACCTACATC GTCGACTACCCGGTCGAGGTATCGCCGCTGGCGCGCGGCTCGGACACGCAGCCGGGCATTACCGAACGCTTCGAACTGTT CATCACGGGCCGCGAGATCGCCAACGGCTTCTCCGAGCTTAACGACCCGGAAGACCAGGCCGAACGTTTCCGCAAGCAGG TCGAGCAGAAGGATGCGGGCGACGAGGAAGCGATGTACTTCGACGCCGATTACATCCGCGCGCTCGAGTACGGCATGCCT CCGACAGGCGGCTGCGGTATCGGCATCGACCGCCTGGTGATGCTGCTGACCGACAGCCCGAACATCCGCGACGTAATCCT GTTCCCGCACCTGCGCCGCGAGGACTGA Protein sequence : MTEPTRAQAATPTTEGLAVDENKIIAERREKLQALRQQGVAFPNDFQPTHQAGALHAQYGETDQATLEASPVEVSIAGRM MLKRVMGKASFATVQDGSGQIQFYITRDKVGEDVYAAFKHWDLGDIISARGELFRTNKGELSVQVRELRLLSKALRPLPD KFHGLADQETKYRQRYVDLIVSPETRSTFRARTQAISSIRRHMADAGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMF MRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSATVTYQG RELDLSKPFHRLTICGAIQKYAPEYTDAQLADADFLRAELKNKFKINTSAPQFLNAGLGTLQLVLFEETAEAQLWEPTYI VDYPVEVSPLARGSDTQPGITERFELFITGREIANGFSELNDPEDQAERFRKQVEQKDAGDEEAMYFDADYIRALEYGMP PTGGCGIGIDRLVMLLTDSPNIRDVILFPHLRRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-134 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-83 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_583189.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-134 | 55 |
