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Name : tnpA (Rmet_6188) Accession : YP_581997.1 Strain : Genome accession: NC_007972 Putative virulence/resistance : Unknown Product : transposase TnpA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 36422 - 39391 bp Length : 2970 bp Strand : + Note : Tn4378 mercury transposon Tn3 family DNA sequence : ATGCCACGTCGTTCCATTCTGTCCGCCGCCGAGCGGGAAAGCCTGTTGGCGTTGCCGGATACCAAGGACGACTTGATCCG ATACTACACGTTCAGCGATACCGACCTCTCCATCATCCGGCAACGGCGCGGGCCTGCGAACCGCTTGGGCTTTGCAGTTC AGCTCTGCTACCTGCGCTTTCCCGGCATCCTCCTTGGCGTCGATGAGCCGCCGTTTCCGCCCTTGCTGAAACTGGTCGCC GACCAGCTCAAGGTCAGTGTCGAAAGCTGGGGCGAGTACGGGCAGCGGGAGCAGACCCGGCGCGAGCATCTGGTCGAGTT GCAAACGGTGTTCGGCTTCCAGCCCTTCACCATGAGCCACTACCGGCAGGCCGTCCACACGCTGACCGAGCTGGCCATGC AAACCGACAAGGGCATTGTGCTGGCCAGCGCCTTGATCGAGCATCTGCGGCGGCAGTCGGTCATTCTGCCTGCCCTCAAC GCCGTCGAGCGGGCGAGCGCCGAAGCGATCACCCGCGCCAACCGGCGCATCTACTACGCCTTGGCCGAACCACTGTCGGA CGCGCATCGCCGCCGCCTCGACGATCTGCTCAAGCGCCGGGACAACGGCAAGACGACTTGGCTGGCCTGGCTGCGCCAGT CACCCGTCAAGCCCAATTCGCGGCATATGCTGGAGCACATCGAACGACTCAAGGCATGGCAGGCGCTCGATCTGCCTACC GGCATCGAGCGGCTGATCCACCAAAACCGGCTGCTCAAGATCGCCCGCGAGGGCGGCCAGATGACACCCGCCGACCTGGC CAAGTTCGAGGCGCAGCGGCGCTACGCGACCCTGGTGGCGCTCGCCATTGAAGGCATGGCCACCGTCACCGACGAAATCA TCGACCTGCACGACCGCATCCTGGGCAAGCTGTTCAACGCCGCCAAGAACAAGCATCAGCAGCAGTTCCAGGCGTCCGGC AAGGCGATCAACGCCAAGGTGCGGCTGTTCGGGCGTATCGGTCAGGCACTGATCGAGGCCAAGCAATCGGGCCGCGATCC GTTTGCCGCCATCGAGGCCGTCATGTCCTGGGACGCCTTCGCCGAGAGCGTCACCGAAGCGCAGAAGCTCGCGCAGCCCG AGGACTTCGATTTCCTGCACCGCATCGGCGAGAGCTACGCCACGCTGCGTCGCTACGCGCCGGAATTCCTCGCCGTGCTC AAGCTGCGGGCCGCGCCCGCTGCCAAGGATGTGCTGGAGGCCATCGAAGTGCTGCGCAACATGAACAGCGACAACGCCCG CAAGGTGCCCGCCGACGCGCCAACCGATTTCATCAAGCCGCGCTGGCAGAAGCTGGTGATGACCGACACCGGCATCGATC GGCGCTACTACGAACTGTGCGCGCTGTCGGAGATGAAAAACGCCCTGCGCTCCGGCGACATCTGGGTGCAGGGATCGCGC CAGTTCAAGGACTTCGAGGACTACCTGGTGCCACCCGCGAAATTCGCCAGCCTCAAGCAGGCCAGCGAATTGCCGCTGGC CGTGGCCACCGATTGCGACCAGTACCTGCATGACCGGCTGACGCTGCTGGAAACGCAGCTCGCCACCGTCAACCGCATGG CGCTGGCCAACGAGCTGCCGGACGCCATCATCACGGAGTCGGGCCTGAAGATCACGCCGCTCGATGCGGCGGTGCCCGAC ACCGCGCAGGCGCTGATCGACCAGACAGCAATGATCCTGCCGCACGTCAAGATCACCGAACTGCTGCTGGAGGTAGACGA ATGGACAGGCTTCACCCGGCACTTCGCGCACCTGAAATCGGGCGACCTGGCCAAGGACAAGAACCTGCTGCTGACCACGA TCCTGGCCGACGCCATCAACCTGGGTCTGACCAAGATGGCGGAGTCCTGCCCCGGAACGACCTACGCCAAGCTCGCCTGG CTCCAAGCCTGGCATACCCGCGACGAAACCTATTCGTCGGCGCTGGCCGAACTGGTCAATGCGCAGTTCCGGCATCCCTT CGCCGAGCACTGGGGCGACGGCACCACGTCATCGTCGGACGGCCAGAATTTCCGAACCGGCAGCAAGGCCGAGAGCACTG GCCACATCAACCCGAAATATGGCAGCAGTCCTGGGCGGACTTTCTACACCCACATCTCCGACCAGTACGCGCCATTCCAC ACCAAGGTGGTCAATGTCGGCGTGCGCGACTCGACCTATGTGCTCGACGGCTTGCTGTACCACGAGTCCGACCTGCGCAT CGAGGAGCACTACACCGATACGGCAGGATTCACCGATCATGTATTTGGCCTGATGCACCTGCTGGGCTTCCGCTTTGCGC CGCGCATCCGCGACCTGGGCGACACCAAGCTGTTCATCCCCAAGGGCGACACCGTCTACGACGCGCTCAAGCCGATGATT AGCAGCGACAGACTGAACATCAAGGCTATTCGCGCCCATTGGGATGAAATTCTACGGCTGGCCACGTCGATCAAGCAGGG CACGGTGACGGCTTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGCCAGAACGGCCTGGCCGTGGCCCTGCGCGAGC TGGGGCGTATCGAGCGCACGCTGTTCATCCTGGATTGGTTGCAAAGCGTGGAGCTGCGCCGTCGCGTGCACGCTGGGCTG AACAAGGGCGAAGCCCGCAATGCGCTGGCCCGCGCCGTGTTCTTCAACCGTCTGGGTGAAATCCGCGACCGCAGCTTTGA GCAGCAGCGCTACCGTGCCAGCGGCCTCAACCTGGTGACGGCGGCCGTCGTGCTATGGAACACGGTCTATCTGGAACGGG CTGCGCACGCGCTGCGGGGCAACGGCCACGCCGTCGATGACGCGCTGTTGCAGTACCTGTCGCCGCTCGGCTGGGAGCAC ATCAACCTGACCGGCGATTACCTCTGGCGCAGCAGCGCCAAGATCGGCGCGGGCAAGTTCAGGCCGCTGCGGCCGTTGCA ACCTGCTTAG Protein sequence : MPRRSILSAAERESLLALPDTKDDLIRYYTFSDTDLSIIRQRRGPANRLGFAVQLCYLRFPGILLGVDEPPFPPLLKLVA DQLKVSVESWGEYGQREQTRREHLVELQTVFGFQPFTMSHYRQAVHTLTELAMQTDKGIVLASALIEHLRRQSVILPALN AVERASAEAITRANRRIYYALAEPLSDAHRRRLDDLLKRRDNGKTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPT GIERLIHQNRLLKIAREGGQMTPADLAKFEAQRRYATLVALAIEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASG KAINAKVRLFGRIGQALIEAKQSGRDPFAAIEAVMSWDAFAESVTEAQKLAQPEDFDFLHRIGESYATLRRYAPEFLAVL KLRAAPAAKDVLEAIEVLRNMNSDNARKVPADAPTDFIKPRWQKLVMTDTGIDRRYYELCALSEMKNALRSGDIWVQGSR QFKDFEDYLVPPAKFASLKQASELPLAVATDCDQYLHDRLTLLETQLATVNRMALANELPDAIITESGLKITPLDAAVPD TAQALIDQTAMILPHVKITELLLEVDEWTGFTRHFAHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAW LQAWHTRDETYSSALAELVNAQFRHPFAEHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFH TKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGDTKLFIPKGDTVYDALKPMI SSDRLNIKAIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGL NKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAVVLWNTVYLERAAHALRGNGHAVDDALLQYLSPLGWEH INLTGDYLWRSSAKIGAGKFRPLRPLQPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 94 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 93 |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 89 |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 73 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | YP_581997.1 | transposase TnpA | VFG1031 | Protein | 0.0 | 93 |
