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Name : tnpA (Rmet_6260) Accession : YP_582069.1 Strain : Genome accession: NC_007972 Putative virulence/resistance : Unknown Product : transposase catalytic site ISRme9 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 113067 - 114620 bp Length : 1554 bp Strand : - Note : - DNA sequence : ATGCCGGCCAACCGGATGACCATGCGCAAAATCAAGGAAGTGCTTCGCCTGAAGTGGGCGTGTGGCCTTTCGCACCGGCA GATCGCTAGGGCGACGGGTGTGAGTGTTGGCGCCGTTTCGCAGTACGCGGCAATGGCGAAGGCAGCGGGGCTGGATTGGC CGCAGGCGGACAGCCTGAACGAAGATACGCTGGAGCAGCGGCTGTTCGGCGCGCAGAAGCCGGCCAACAGCCCGGGCGGG CGGGTGATGCCGGACTTCCCCTATCTGCATCGCGAGTTGCGCCGCAAGGGCGTGACACTGCAGTTGCTGTGGGAGGAATA CCTGGAGGCGAATCCAAACGTCCCCATTTACCAATACACGCAGTTCTGCTGCCGTTACCGGGACTGGGCAGCGACGCTCA AGCGGTCCATGCGCCAGCAGCACCGCGCCGGCGAGAAGCTGTTTGCTGACTTCGCCGGTCAGATGGTGCCGATTCTGGAT GCGGAGGGCGGCATTGCCTTCGAAGCCAGCATCTTCGTCGCTGTGCTCGGCGCTTCAAATTACACGTACGCGTGCGCCAC CCGGGGGCAGACCACTGCCGACTGGATCGGGGGAATGGTCTGCGCGATGGAATTCGCCGGCGGCGTGCCCGAGCTGCTTG TTCCGGACAACCCGCGCGCGCTGGTGGCTCGCCCTGACCGATACGAGCCAGTGCTGTCCCGAACTGCAGAAGACTTCGTT CATCACTACGGCACGGCCATGCTGCCAGCACGGCCACGCAAGCCGCAAGACAAGGCCAAGGTCGAGACTGGCGTACTGAT CGTCGAGCGGTGGATCCTAGCGCGGCTGCGCAATCACCGCTTCTACAGCTTGGGCGAGCTCAACAAGGCTATCAAGAAGC TCGTCGCCGACCTGAACGACCGACCGTTCAAGAAGCTGCCTGGCACGCGCCGGGAGTGGTTCGAGCGGTTGGACCGGCCA GTGCTGCGACCGCTGCCGCCGCGGCGCTACGAAGTTGCAACGTTCAAACAGTGCCGCGTCAACGTCGACTACCACGTCGA GATCGACGGCCACTACTACAGCGTGCCGCATGCCCTGGTGCGCAAGGCGGTGGAGGCTCGCGTAACTCGCCACACCATCG AGATCCTGTACGGCGGCAAACGGGTGGCGCTGCACGCGCGCAATACCCGCAAGGGCAGCCACAGCACGGTCAAGGAACAC ATGCCGGTGGCCCACCGCGCGCACCTCGAATGGACGCCCGGCCGGCTGCTCAACTGGGCAGCCTCGATTGGGCCCAACGT CGCCGTCATCGTCGAATACCAGCTCACCCACAAGAGCCATCCCGAGATGGGCTATCGCGCCTGCCTGGGTCTGCTGAGTC TGGCCAAGAAGTACAGCAAGGAGCGGCTCGAAGCCGCTTGCGCCCGCGCCGTCGCCATTGGCTCGCTCACGCGTAAGTCT GTGGTCTCCATCCTTGAAAACCATCTGGACCGGCAAGCCACTCTGCCGGTATCGCAAACCGAGTGGCATTCCCCCATGCA CGACAACGTGCGCGGACCCGACTACTACCATTAG Protein sequence : MPANRMTMRKIKEVLRLKWACGLSHRQIARATGVSVGAVSQYAAMAKAAGLDWPQADSLNEDTLEQRLFGAQKPANSPGG RVMPDFPYLHRELRRKGVTLQLLWEEYLEANPNVPIYQYTQFCCRYRDWAATLKRSMRQQHRAGEKLFADFAGQMVPILD AEGGIAFEASIFVAVLGASNYTYACATRGQTTADWIGGMVCAMEFAGGVPELLVPDNPRALVARPDRYEPVLSRTAEDFV HHYGTAMLPARPRKPQDKAKVETGVLIVERWILARLRNHRFYSLGELNKAIKKLVADLNDRPFKKLPGTRREWFERLDRP VLRPLPPRRYEVATFKQCRVNVDYHVEIDGHYYSVPHALVRKAVEARVTRHTIEILYGGKRVALHARNTRKGSHSTVKEH MPVAHRAHLEWTPGRLLNWAASIGPNVAVIVEYQLTHKSHPEMGYRACLGLLSLAKKYSKERLEAACARAVAIGSLTRKS VVSILENHLDRQATLPVSQTEWHSPMHDNVRGPDYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-102 | 47 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 7e-103 | 47 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 2e-102 | 47 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 7e-101 | 45 |
