Gene Information

Name : tnpB (Rmet_6259)
Accession : YP_582068.1
Strain :
Genome accession: NC_007972
Putative virulence/resistance : Unknown
Product : transposase ISRme9
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 112304 - 113059 bp
Length : 756 bp
Strand : -
Note : ATP binding site

DNA sequence :
ATGCTGATGCAACACACCGTCGGCCAGCTCAAGGCCCTGAAGCTCGACGGGATGGCGCGGGCCTTCGAGGAACAGTCTGC
CCTGACCGCCAGCTCCAGCCTGCCGTTCGAAGAACGCTTCTCCATGCTGGTCGACCGGGAGATTGCTTGGCGTGACACCA
GGCGCCTGGAGCGGCTGCTGCGCTCGGCCAAGCTCAAGCACGCCCAGGCATGCCTCGAGGATGTGGTCTATGACGGCAGC
CGCGGTCTTGACCAGCGGCTGGTCGCCAGCCTGGCCAGTTGCGACTGGATCCGCAATGCTCAGAGTCTCATCCTTACCGG
GGCGACCGGTGCCGGCAAGTCCTGGCTGGCCTGTGCGTTTGCTCAGCAGGCCTGTCGGCAGGGATTCTCTGCGCTCTACC
TGCGGGTGCCGCGACTGTTCGAGGAACTGCAGATCGCCCACGGCGACGGGAGCTTCACCCGCCGCCTGGCACAGCTCGCG
CGCATCGATGTCCTGGTGCTGGACGACTGGGGCCTACAGGAGCCTTCTAAAAGCGCACGCGGCGATCTGCTGGAAGTTCT
GGACGATCGCGTCGGCACCCGCTCGACCATCGTGACCAGCCAGCTCCCGATCGAGCATTGGCACCAGTGGTTGGATGATC
CGACGCTGGCTGACGCCATTCTGGACCGGCTGGTCCACCAGGCGCACAAGGTATCGCTCAAAGGCGAATCCATGCGCAAG
CGCTCGGCTACCGACGTCAAGAAACGGGCATCGTGA

Protein sequence :
MLMQHTVGQLKALKLDGMARAFEEQSALTASSSLPFEERFSMLVDREIAWRDTRRLERLLRSAKLKHAQACLEDVVYDGS
RGLDQRLVASLASCDWIRNAQSLILTGATGAGKSWLACAFAQQACRQGFSALYLRVPRLFEELQIAHGDGSFTRRLAQLA
RIDVLVLDDWGLQEPSKSARGDLLEVLDDRVGTRSTIVTSQLPIEHWHQWLDDPTLADAILDRLVHQAHKVSLKGESMRK
RSATDVKKRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 1e-41 45
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 8e-42 45
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 8e-42 45
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 8e-43 42