Gene Information

Name : pbrA (Rmet_5947)
Accession : YP_581756.1
Strain :
Genome accession: NC_007971
Putative virulence/resistance : Resistance
Product : Pb(II) resistance ATPase PbrA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 112097 - 114496 bp
Length : 2400 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAATGTGGCTCGAAGGGATGTGGCTGCGCTTCCGTTGCGACGCGCAACCCAGAACCGAGCACGGTTGGCGCGGG
GCTGAAGCAGGCGCGCTACCGAATCGAAAACATGGACTGTCCGACCGAAGAGGCGCTGATTCGCGACAAGCTCGCGAAAC
TGCCCGGCGTGGGAGGACTTGAGTTCAATTTGATGCAGCGAACGCTAGCCGTTAGCCACCAGATGGCGTCACCGGGCCCT
ATCGAGGAGGCGCTATCGGCCATCGGGATGCGGGCGGTTCGCATGGACGAAGCAACGCCCCTGCAAAATACGGTACTGGC
CATCCACCAGATGGATTGCCCGACCGAGGAGGCGCTGATTCGCAGCAAGCTTGCCGGCATACCTGGCGTCGCCAGCCTCG
AGTTCAATCTGGTGCAGCGGACGCTGCACGTCTGGCATGCGGCTGACACGCTATCCCACGTGCTTACAGCCCTGAAATCA
CTCGGCTTCGACGCCGAAGTGCGCAGCGCCGGTGCCCCCGCAGCGGCCGAGGCACCGGGGCCCGCGCGCACGAACTGGTG
GCCGCTTGCGGTGTCAGGGGTGGCCGCGACGCTGGCGGAGGTCGTGTACTGGCTCCATGGTGGCAACCATTGGGGCGTGG
TCGCGCTGGCGCTGGCGGCCATCTTCACTGGTGGCCTCACCACCTATAAGAGGGGCTGGATCGCGCTCAGGAATCGCAAC
CTGAACATGAATGCGCTGATGTCCATTGCGGTCACTGGCGCCATGCTGATTGGTCATTGGCCCGAGGCGGCGATGGTGAT
GGTGCTTTTTGCGCTGGCCGAAGTCATCGAGGCCAAGTCGCTGGATCGCGCCCGCAACGCCATTCGCGGCCTGATGGATC
TCGCACCGGATACCGCACTGATTCAGCAAGCTGACGGCAGTTGGGCCGAGGTGGATGCCAAGGCCGTCGCAGTTGGTAGC
CGGATTCGAGTCAAACCTGGTGAACGCATCGCCCTCGACGGTCAGGTCATTGAGGGGCGCTCCACCGTCAACCAGGCACC
GATTACCGGCGAGAGCCTGCCGGTCGAAAAGATCGAGGGCGATCCTGTGTTCGCTGGCACGATCAACGAGTCCGGCTCAT
TCGAATTCCGCGTCACGGCGGCAGCCAACGCGTCAACATTGGCGCGCATCATTCACGCCGTCGAAGCGGCCCAGGGAAGC
CGCGCACCGACGCAGCGCTTCGTCGACCAGTTTGCCCGCCTCTACACACCCGTCGTATTCGCCGTGGCCTTGGCGGTGGC
GGTTCTACCCCCGTTGGTGTTCGGTGGACCGTGGCTGGACTGGATCTACAAGGCCCTGGTCCTGCTGGTGATCGCCTGCC
CCTGCGCTCTGGTGATTTCCACGCCGGTGAGCATTGTCAGCGGCCTGGCCGCGGCCGCGCGGCATGGCATCCTCATCAAA
GGCGGCGTCTATCTGGAAGAGGGGCGCAAGCTGAAGTGGTTGGCCTTGGACAAGACTGGCACCATCACGCACGGCAAGCC
CGCCCTGACCGATTTCGTGGTGTGGGGCGACGCCAATCCGGCCACATCCAGGCTGCTGGCTGCGAGCCTGGCTGCCCGCT
CGGATCACCCAGTGTCCCTGGCGGTGGCGCGCGCCGCCGAAGGTGAAGGATTGATACCTTGCGACGTCGCCGATTTCGCG
GCATTGCCTGGCCGTGGGGTGCGTGGCAGCGTCGATGACCACTCCTACCATCTGGGCAACCACCGGCTGGTCGAGGAACT
GGGCGTCTGTTCGCCAGAACTCGAATCGCGGCTCGCTGCGCTTGAGGCCGAAGGCAAGACCGTTGTAATGCTGGTCGGAC
CAGAGGGGGTGCAGGCGTTGTTCGCAGTGGCCGACACAGTGAAGGAGAATAGCCGTCAAGCCATTGCCGATTTGCACACC
TTGGGTGTCAAAACGATGATGCTGACGGGCGACAATCCGCATACCGCCACGGCAATTGCTGGCCAGGTCGGCATTGACCG
CAGTCGGGGCAATCTGCTGCCCGAAGACAAGCTGCGGGAAGTCGAACAACTGTCAACGGACGGGAAGACTGGCATGGTGG
GCGACGGCATTAACGATGCGCCGGCGTTGGCGCGAGCGGACATTGGCTTTGCGATGGGCGCGGCAGGAACCGACACGGCG
ATCGAAACTGCCGACGTGGCGTTGATGGACGACGATCTGCGCAAGCTGCCGACGTTCGTGCGGCTGTCCCGTGCCACCGC
CAGCGTCCTGAAGCAGAACATCGCTCTGGCGCTCGGCATCAAGGCGGTGTTCCTGGTGCTCACCTTCACTGGCCAGGCCA
CGATGTGGATGGCCGTGTTCGCCGACATGGGCGCCAGCCTGCTGGTGGTCGGCAATGGATTGAGGCTGTTGCGTCGATGA

Protein sequence :
MSECGSKGCGCASVATRNPEPSTVGAGLKQARYRIENMDCPTEEALIRDKLAKLPGVGGLEFNLMQRTLAVSHQMASPGP
IEEALSAIGMRAVRMDEATPLQNTVLAIHQMDCPTEEALIRSKLAGIPGVASLEFNLVQRTLHVWHAADTLSHVLTALKS
LGFDAEVRSAGAPAAAEAPGPARTNWWPLAVSGVAATLAEVVYWLHGGNHWGVVALALAAIFTGGLTTYKRGWIALRNRN
LNMNALMSIAVTGAMLIGHWPEAAMVMVLFALAEVIEAKSLDRARNAIRGLMDLAPDTALIQQADGSWAEVDAKAVAVGS
RIRVKPGERIALDGQVIEGRSTVNQAPITGESLPVEKIEGDPVFAGTINESGSFEFRVTAAANASTLARIIHAVEAAQGS
RAPTQRFVDQFARLYTPVVFAVALAVAVLPPLVFGGPWLDWIYKALVLLVIACPCALVISTPVSIVSGLAAAARHGILIK
GGVYLEEGRKLKWLALDKTGTITHGKPALTDFVVWGDANPATSRLLAASLAARSDHPVSLAVARAAEGEGLIPCDVADFA
ALPGRGVRGSVDDHSYHLGNHRLVEELGVCSPELESRLAALEAEGKTVVMLVGPEGVQALFAVADTVKENSRQAIADLHT
LGVKTMMLTGDNPHTATAIAGQVGIDRSRGNLLPEDKLREVEQLSTDGKTGMVGDGINDAPALARADIGFAMGAAGTDTA
IETADVALMDDDLRKLPTFVRLSRATASVLKQNIALALGIKAVFLVLTFTGQATMWMAVFADMGASLLVVGNGLRLLRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 71
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 9e-112 48
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 9e-112 48
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 4e-110 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pbrA YP_581756.1 Pb(II) resistance ATPase PbrA BAC0298 Protein 0.0 100