Gene Information

Name : Pcryo_0093 (Pcryo_0093)
Accession : YP_579361.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 107114 - 109000 bp
Length : 1887 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGACTATTTCAGATATTGGCTCGCAAGCCACCACACATACCCCTGTAAAAGCAAGCAAAGCAGACGCACTAAAAACTCC
CGCCCATCGCAGCGAAACTGACGCCCGTTTTGAAGAAGACGCACGCGACCTACATCGCATTTTGCCTGCCTCTCGCAAAG
TCTATATCGAAGGCTCACGCCCTGATATTCAAGTGCCGATGCGCGAGATTACCCTTGACCCTACTCCTATCCAAGGCGTG
TCCGAGTCCGAGTGGGAGCAAAATCCACCGTTTTATGTCTATGACACCTCAGGCGTCTATACCGACCCCAATGCCGCAAT
TGACTTGACCAAAGGTCTGCCAAAACTACGCGAAGGTTGGATAGATGAGCGCGGTGATACCGAACAGCTAGCTGGTTTAT
CAAGCTCATACGGTCTGGCGCGCGCACGTGATATCAGTACTGCAAACTTACGCTTTGCTCATATTGACAAGCCTCGCCGT
GCTAAAGCTGTTGATGGGAAAGTAGGTAACGTTACTCAATTGCACTATGCTCGCCGTGGCATTATTACCCCAGAAATGGA
ATATATAGCTATCCGCGAAACCCAAAAACAGCATGAGCTGACTGATATGCGCCAGCACGAAGGCGAGACTTTTGGTGCGC
ACACGCCAGCGATTATCACCCCAGAATTTGTCCGCAGTGAAGTTGCCGCGGGTCGCGCTATTATCCCTAACAATATCAAC
CATCCTGAATCTGAGCCGATGATCATCGGGCGTAATTTTTTGGTGAAAATTAATGCCAATATTGGTAACTCAGCACTAGG
TTCTTCTATTGATGAAGAAGTGTCGAAGATGACTTGGGCGACGCGTTGGGGTGCGGATAACATCATGGATCTGTCTACTG
GTAACCATATTCATGAAACCCGTGAATGGCTGATTCGTAACTCACCCGTACCGATTGGTACGGTGCCGATTTATCAAGCG
TTAGAAAAAGTCGATGGCGTAGCCGAAGATTTAACGTGGGAGATATTTCGCGATACTTTGATTGAGCAAGCCGAGCAAGG
TGTTGATTATTTCACCATTCACGCTGGCGTATTGCTTGAATACGTTCCGCTAACTGCCGGACGCTTAACCGGTATCGTCT
CGCGTGGTGGCTCTATCATGGCACAGTGGTGCATGTTTCATAATAAAGAAAGCTTTTTATATACCCATTTTGAAGACATC
TGCGAGATTATGAAACAGTATGATGTGGCATTTAGCTTAGGCGATGGCTTACGCCCAGGCTGCTTGCAAGATGCCAATGA
TGAAGCGCAGTTTGGTGAGCTGCGAACCCTTGGCGAGCTGACCCAAGTGGCATGGAAGCATGACGTACAGGTCATGATTG
AAGGTCCGGGACACGTGGCAATGAACCGTATTAAAGAAAATATGGATTTGCAGCTTGAAGTTTGTGCTGATGCGCCCTTT
TATACACTAGGACCCTTAACCACCGATATCGCACCGGGTTATGACCATATTACCAGTGCGATAGGCGCGGCGATGATTGG
CTGGTTTGGCACGGCGATGCTGTGTTATGTGACCCCAAAAGAGCATTTAGGGTTGCCGAATAAGAAAGATGTCAAAGATG
GCATCATCACTTATAAAATCGCCGCTCATGCTGCTGACCTTGCCAAAGGACACCCCGGTGCGCAGGCACGTGACAACGCG
TTATCCAAAGCGCGTTTTGAGTTCCGCTGGGACGATCAGTTCAATCTGGCGCTTGATCCGGATACTGCGCGTGAATTTCA
TGATGAAACCTTACCCAAAGATGCACACAAGACGGCACACTTTTGCTCCATGTGTGGTCCAAAGTTTTGTTCAATGAAAA
TCACTCAGAATGTCCGTGAGTATGCCAAAGGACTAAATGCCCAATAA

Protein sequence :
MTISDIGSQATTHTPVKASKADALKTPAHRSETDARFEEDARDLHRILPASRKVYIEGSRPDIQVPMREITLDPTPIQGV
SESEWEQNPPFYVYDTSGVYTDPNAAIDLTKGLPKLREGWIDERGDTEQLAGLSSSYGLARARDISTANLRFAHIDKPRR
AKAVDGKVGNVTQLHYARRGIITPEMEYIAIRETQKQHELTDMRQHEGETFGAHTPAIITPEFVRSEVAAGRAIIPNNIN
HPESEPMIIGRNFLVKINANIGNSALGSSIDEEVSKMTWATRWGADNIMDLSTGNHIHETREWLIRNSPVPIGTVPIYQA
LEKVDGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLEYVPLTAGRLTGIVSRGGSIMAQWCMFHNKESFLYTHFEDI
CEIMKQYDVAFSLGDGLRPGCLQDANDEAQFGELRTLGELTQVAWKHDVQVMIEGPGHVAMNRIKENMDLQLEVCADAPF
YTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAQARDNA
LSKARFEFRWDDQFNLALDPDTAREFHDETLPKDAHKTAHFCSMCGPKFCSMKITQNVREYAKGLNAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 82
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 82
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73