Gene Information

Name : Pcryo_0631 (Pcryo_0631)
Accession : YP_579898.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 749238 - 750056 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGTGCCGTGTATTGAGCGTTAAGCCATCAAGCTATTACGATTGGATAAATCGTGATATTAGCAGCCAGCAGATACATCG
TAACCAGTCTGAGCTGCTAATCAAAGCGGCACACAGTGAAACAAAGGAGCGCTACGGCTTTGAGCGTCTGCATGCGCATC
TAAATGAGCAAGGATATGATATCAGCCCATACATGGTCAGAAATATTAAAGAGGAGCATGGCATCAAATGCCGTCGCCAC
AAGCGCTTTAAGGTCACCACTGACTCTAATCATAATAAGCTCATCTATGACAACGTGCTCGATCAGCAGTTTGACGTCAA
CCGCCCTAACGAAGCCTGGGTCAGTGATATCACCTATATCTGGACAACCGAGGGCTGGCTGTACTTAGCAGGCGTTAAAG
ACTTGTATACCAAAGAGCTGGTTGGCTATGCCATCAACAAACGTATGACCGCTGACTTAGTTTGCAAAGCATTGAACATG
GCAATTAAGAATAAGAGACCAAGCAAGGGACTAATTGTTCACTCTGACAGAGGCGGTCAGTACTGTAGCCATGCGTATCA
TAAAATTATTAAACAGCATCAGTTTAAAGGCTCCATGAGTGGTAAAGGTAATTGTTATGACAACGCACCCATAGAGAGCT
TCTGGGGTGTATTAAAGAATGAGCTGGTATATCATCAGGACTATAAGACTAGATTTGCCGCTATTACCGATATCATTAGA
TATATCGAGTTGTACTACAACCAAACGAGAATTCAAAAGGGTTTAGGCTATAAATCGCCAAGACAGGTGTGGTTTGACTA
TTATCGTCAAGCTGCATAA

Protein sequence :
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYDISPYMVRNIKEEHGIKCRRH
KRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYIWTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKRPSKGLIVHSDRGGQYCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-57 47
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-58 47
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-58 47
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-57 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-57 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-56 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-57 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-57 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-57 46
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-43 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-43 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcryo_0631 YP_579898.1 integrase catalytic subunit VFG1706 Protein 7e-58 47