Gene Information

Name : Pcryo_0613 (Pcryo_0613)
Accession : YP_579880.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 730440 - 731717 bp
Length : 1278 bp
Strand : +
Note : -

DNA sequence : 
ATGATAGATATCAATAGTATCAAAATAGCTGTAATTGGTCTTGGTTATGTGGGGCTACCTTTAGCAGTTGAATTTGGTAA
GCATTTTTCTGTAATTGGCTTTGATATTAACACTAAGCGCGTGCAAGAGTTAAGAGATGGCTTTGATGGTACGCTTGAAG
TCAACAGTGAAGAGCTCAAATCTGCTAGTTCATTAAAATTTACCACTGAATTGGGCGATATTGCTGATTATAATTTTTAT
ATCGTTACCGTACCTACGCCCATTGATGAAAATAACGCACCAGATCTTACCCCTTTAGAGAGTGCCTCAGCTGCTGTGGG
AAAAGTGATAAAAGCTGGTGATATCGTGGTTTATGAATCGACTGTCTACCCTGGTGCGACAGAAGAAGTTTGTATTCCTA
TTATAGAAAAAGTATCTGGTTTAACTTTTAACCAAGATTTTTATGTTGGATATAGCCCAGAACGTATCAATCCAGGTGAT
AAGGTAAATACCCTAACTAAAATTACCAAGATTACTTCAGGCTCAACCCCAGAGGCGGCTGACTTAATCGATAGTCTCTA
TGCTTCTATTATTACGGCTGGTACTTATCGCGCAACATCAATCAAAGTCGCTGAAGCTGCAAAGGTCATTGAAAATACCC
AGCGCGACTTAAATATCGCTATCGTTAATGAGTTTGCTAAGATATTTAATATCATCGGCATAGACACTCAAGCGGTATTG
GATGCTGCAGGTAGTAAATGGAATTTTCTTAAATTTAAGCCGGGTTTGGTTGGTGGGCATTGTATTAGTGTCGATCCTTA
TTATTTAACTCATAAAGCACAAGAAGTTGGTTATCGTCCAGAAGTTATCCTTGCTGGCAGACGTATCAACGACGGTATGG
GGCAATATGTGGCCACGCAGATGGTTAAAAAACTGGCGCGTAATAAAATACATATCGATGAAGCGAAGGTATTGGTACTC
GGTTTTACTTTTAAAGGCGACTGTCCTGATACCCGTAATACCAAGGTCATTGATATTATCAAAGAGCTAAAAAGCTTTAA
TATCAATGTTGATGTTTATGATGATTGGGCTGATAAGCAAGAAGTATGTGAGCATTACGGCATTGAATTGATTAATGATT
TGCAGAAAGGCTATTACGATGGCGTCGTGGTTGCCGTTGATCACAGCAAGTATAAGAAGATGGGCGTAGAAGCCATTAGA
GCGCTAGCTAAATCAAACCATGTTGTTTACGACGTCAAGCATGTATTCCAAGAAGGCGAAACAGATATTCGTTTATAA

Protein sequence : 
MIDINSIKIAVIGLGYVGLPLAVEFGKHFSVIGFDINTKRVQELRDGFDGTLEVNSEELKSASSLKFTTELGDIADYNFY
IVTVPTPIDENNAPDLTPLESASAAVGKVIKAGDIVVYESTVYPGATEEVCIPIIEKVSGLTFNQDFYVGYSPERINPGD
KVNTLTKITKITSGSTPEAADLIDSLYASIITAGTYRATSIKVAEAAKVIENTQRDLNIAIVNEFAKIFNIIGIDTQAVL
DAAGSKWNFLKFKPGLVGGHCISVDPYYLTHKAQEVGYRPEVILAGRRINDGMGQYVATQMVKKLARNKIHIDEAKVLVL
GFTFKGDCPDTRNTKVIDIIKELKSFNINVDVYDDWADKQEVCEHYGIELINDLQKGYYDGVVVAVDHSKYKKMGVEAIR
ALAKSNHVVYDVKHVFQEGETDIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-132 62
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-132 62
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-107 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcryo_0613 YP_579880.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-133 62