Gene Information

Name : Pcryo_0433 (Pcryo_0433)
Accession : YP_579700.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 530596 - 531096 bp
Length : 501 bp
Strand : -
Note : SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA

DNA sequence :
ATGGCAGCTGTTATGAAAGTAAGAATTTTGACCGTAGGTAATAAAATGCCCAAGTGGGTACAAACTGGTTTCGATGAATA
TCATAAGCGTATTCAGCCTATGCTCACTACCGAAGTCGTTGAAATTGCGGCGGCAAAACGTGCTAAGAATCCATCAGATG
CCAATTTAGCTCAATACCGTGAGCAAGAAGGTCAGGCGATATTAGCCGCTCATGCTGTAGCAGGACGTGAGCAATTGTGG
GTACTTGATGTCAAGGGTAAGATGCTATCGACCGAAAATTTGGCAGATAAATTGTCTGATGGTATGCAGCAAGGCGATGA
TATCGCTTTGGTCATCGGTGGTGCCGATGGTGTGTCACCAGAGGTATTGGCAAAAGCAGATGTGAAATGGTCGTTATCGG
CGCTTACGCTACCGCATCCTTTAGTGCGCGTTGTCCTCATGGAGCAGCTATATCGCGCGATGAGTATCAATCATAACCAC
CCTTATCACCGTGGTAATTAA

Protein sequence :
MAAVMKVRILTVGNKMPKWVQTGFDEYHKRIQPMLTTEVVEIAAAKRAKNPSDANLAQYREQEGQAILAAHAVAGREQLW
VLDVKGKMLSTENLADKLSDGMQQGDDIALVIGGADGVSPEVLAKADVKWSLSALTLPHPLVRVVLMEQLYRAMSINHNH
PYHRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 8e-26 41
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 8e-26 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-25 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 8e-26 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-25 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 8e-26 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 8e-26 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 8e-26 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 8e-26 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 8e-26 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 8e-26 41
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 8e-26 41