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Name : Pcryo_0249 (Pcryo_0249) Accession : YP_579517.1 Strain : Psychrobacter cryohalolentis K5 Genome accession: NC_007969 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 293243 - 294811 bp Length : 1569 bp Strand : + Note : - DNA sequence : ATGATGCAACTGCCGTACAGTTTTGCAAAACGCCATCAGATTTTGGTTATTCTAGCCATTGATCCTGAGCTGCCACCGAC ATTGCTATTGACCAAGGTGACGCCGCTTTCAGCAATCAATGAAGCGGTGCGATTTTTACAGCAGCAAGGCATACGCGGTG TGCCAATATATGAAAGTGTCAGCTCGGACGATTTTGAGAAACGCATGAATGCCGCTTATGCAGGTAATACTGGCGAGTCA CAGCATATCGCCGCTGGCCTTGAAGACCATCCTGATCTTGATAGCTTGGCAGATAGCGTGCCTGAAACTGAAGACTTGAT GGACCAACAAGACGATGCACCTATTATCCGTCTGATTAATGCATTATTGTCCGAGGCGATACGTCTAAACGCCTCAGATA TCCATATTGAAACCTTTGAAAAACGCTTGGTCGTTCGATTCCGCGTCGATGGTGAGCTTAAAGAAATCATCACACCAAAA CGTCAATTAGCGCCGTTATTAGTATCGCGTATTAAAGTGATGGCAAAACTGGATATCGCTGAAAAGCGCGTGCCGCAAGA TGGGCGTATTAGCTTGCGCTTAGCGGGGCGCGAGGTTGATGTGCGGGTATCGACATTGCCGTCAAGTTTTGGTGAGCGTG TGGTCATGCGCTTACTAGATAAGCAAGCAGGTCGCCTGAATATGACCTATTTGGGTCTATCTGATAATGATTATAGTGAG CTTAAGCGCTTAATCCATCGCCCGCATGGCATTATTTTAGTGACAGGACCGACAGGCTCGGGTAAAACCACCACGCTATA TTCCGCATTGACTGATTTAAATGATCAAACCCGTAATATCTTGACGGCTGAAGATCCAATTGAATTTCAGCTCGATGGTA TTGGGCAAACGCAGGTCAATAATAAAGTCGATATGACCTTTGCTAAGAGCTTGCGTGCAATGTTGCGTCAAGACCCAGAC GTGGTCATGGTGGGTGAAATTCGCGATTTAGAGACAGCAGAAATCGCTGTGCAAGCATCTTTAACAGGGCATTTGGTCTT ATCAACCCTACATACCAACACCGCTATTGGAGCGGTTACGCGCTTGCAAGATATGGGTGTTGAGCCGTTTTTATTATCAT CATCATTGATAGGCGTGGTCGCCCAGCGTTTGGTACGTACGTTATGTACACATTGTCATGATTGGCAAATAGCTGACCCT GAACAAGCCAAATTGTTTACTGAGATTGGTATTCAATCAATGTCTGACAATATTGCAGCTAACAATGCTGCTGATAATCT GACAGATAAAGCTATCAAGCTACCTAGAGCAGTCGGCTGCGATAAGTGTAACCAATCAGGCTTCAAAGGGCGAACAGCGA TATATGAAGTGGTGCCCGTTGATGATGCGCTGCGACGCATGATTCATAGCAATACCGCCGAGTATGAGCTAGAAGAGTAC GCCCGCCAAAAGACACCATCAATTCGTGCTGATGGTTTGCGTAAGGTAATCGCGGGACGTACGACATTAGAAGAAGTGCT ACGCGTGACCAAAGAAAGCGCCCTACTTGAGGACGCTTTGATTGTTTAG Protein sequence : MMQLPYSFAKRHQILVILAIDPELPPTLLLTKVTPLSAINEAVRFLQQQGIRGVPIYESVSSDDFEKRMNAAYAGNTGES QHIAAGLEDHPDLDSLADSVPETEDLMDQQDDAPIIRLINALLSEAIRLNASDIHIETFEKRLVVRFRVDGELKEIITPK RQLAPLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSFGERVVMRLLDKQAGRLNMTYLGLSDNDYSE LKRLIHRPHGIILVTGPTGSGKTTTLYSALTDLNDQTRNILTAEDPIEFQLDGIGQTQVNNKVDMTFAKSLRAMLRQDPD VVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLQDMGVEPFLLSSSLIGVVAQRLVRTLCTHCHDWQIADP EQAKLFTEIGIQSMSDNIAANNAADNLTDKAIKLPRAVGCDKCNQSGFKGRTAIYEVVPVDDALRRMIHSNTAEYELEEY ARQKTPSIRADGLRKVIAGRTTLEEVLRVTKESALLEDALIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-133 | 61 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-133 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG0182 | Protein | 2e-137 | 61 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG2048 | Protein | 3e-133 | 60 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG1876 | Protein | 9e-127 | 54 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG0233 | Protein | 3e-86 | 47 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG2426 | Protein | 2e-71 | 46 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG0112 | Protein | 2e-84 | 46 |
| Pcryo_0249 | YP_579517.1 | type II secretion system protein E | VFG1880 | Protein | 1e-80 | 45 |
