Gene Information

Name : murD (Pcryo_2343)
Accession : YP_581604.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : -
Position : 2873186 - 2874601 bp
Length : 1416 bp
Strand : -
Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation

DNA sequence :
ATGACCGCTAGCACCGCAACAGAAACCTTACTTCATAAAGGCAGTGGTTTACAAGTCGTGGTCGGTTTGGGGCAGTCGGG
GTTATCGGTCGCGCATTATTTGGCCGAGCAAGGCTACCAAGTTGCCGTCACTGACAATCAAGAAAATCCTGCGTTAGCAA
ATAAGCTACCTGCTACTATTGATATCAGGCAGTTTGGTGCGATCGATGCCGAATTATTACAACAAGCGGCACGGATTATT
ATCAGCCCTGGTATCTCTTTAGATAATGTCGCCATTGCCGCGGCACGAGCTGCAAATATTCCAGTGGTCAGTGATATTCA
GCTATTTTGTGAGGCTTGTACGGTACCAATCGTTGCGATTACAGGTTCAAATGCCAAGAGCACCGTTACGACACTGGTCG
GACAAATGGCGGCAGATGCAGGTATCAATGTTGGCGTAGGCGGTAATATTGGTGTGCCAGCGCTGAGCCTACTGAGTAAT
AAAGAGATGGAGCTGGCGGTTATAGAGTTATCCAGCTTTCAGTTAGAAACGGTCACCAACTTAGGAGCGCAGGTCGCGAC
AGTCCTCAATATGTCGCCTGATCACTTAGATCGTCATGGCGATATGCTCGGCTATCACCAAGCCAAACACCGTATCTTTC
AAGGTGCCAAATCAGTAGTGATTAATCGAGAAGATGCTTTGACGCGGCCACTGGTATCAGACAGTTTGCCAAGATTGAGT
ACTGGTATCCATGCGCCTAATAAAGGACATTATGGACTTATTACGGATACCGCCGGACAGACTTATTTAGCACGCGGCAC
AGAGCGTCTAATATCGGCAGACAAACTCAAGATAAAAGGGCGTCATAACCTGCTCAATGCCCAAGCAGCGTTGGCATTGG
GCGAGCTTGCTGGTTTGCCGCTTGAAATTATGCTCATTACTTTGCAGCAGTTTGCAGGGCTTGAGCATCGCTGCCAATAT
GTCTCTACAGTCGCTGGCATTGATTATTTTAATGACTCTAAAGGCACTAATATTGGCTCAACTATGGCGGCTGTTGAAGG
TTTAGGTGCAGTTTATGCGCCAAAAGACGGTAAGCTGCTATTAATATTGGGCGGTCAAGGTAAAGGTCAGCAGTTCGGTG
AACTTTCGCCCTTTATCAATCAATACGTGAGTCAAGTGCTGTTTATTGGTGAAGATGGTAAGCAGATTGAGCAGCATTTA
CGCGCAGCGGGTCTCAGCGATGAGGTCAGCCTACATCAATGTCAGACATTAGAAAATGCTTTTGCGACGATTGAGCAAGT
AACAGCAAGTAGTTTGTCGCAAGTACAGGCAGTGTTATTGTCACCTGCTTGTGCAAGCTTCGATCAGTTTGATGGGTTTG
TCGCGCGCGGCGAGCACTTTAGCCAGCTCGTTAAACAATTGGATGTTGTGTCTTAA

Protein sequence :
MTASTATETLLHKGSGLQVVVGLGQSGLSVAHYLAEQGYQVAVTDNQENPALANKLPATIDIRQFGAIDAELLQQAARII
ISPGISLDNVAIAAARAANIPVVSDIQLFCEACTVPIVAITGSNAKSTVTTLVGQMAADAGINVGVGGNIGVPALSLLSN
KEMELAVIELSSFQLETVTNLGAQVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINREDALTRPLVSDSLPRLS
TGIHAPNKGHYGLITDTAGQTYLARGTERLISADKLKIKGRHNLLNAQAALALGELAGLPLEIMLITLQQFAGLEHRCQY
VSTVAGIDYFNDSKGTNIGSTMAAVEGLGAVYAPKDGKLLLILGGQGKGQQFGELSPFINQYVSQVLFIGEDGKQIEQHL
RAAGLSDEVSLHQCQTLENAFATIEQVTASSLSQVQAVLLSPACASFDQFDGFVARGEHFSQLVKQLDVVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-77 56
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-77 56