Gene Information

Name : Pcryo_1285 (Pcryo_1285)
Accession : YP_580550.1
Strain : Psychrobacter cryohalolentis K5
Genome accession: NC_007969
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1562385 - 1563152 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGCTATCAGTGAATGAACTACAGCTTGGCTATCATGGCGGACAGACAGTTATCAAAAACTTGTCCCTTGAGTTGCCAGA
AAATAAAGTCATTGGACTCATTGGTCCAAATGGTTGCGGAAAATCTACGCTATTAAAAGGCTTGTGCCGGCTGATTCAAC
CTCAATCGGGCAGAATCTTACTTAGACAACAAGATATGGCGCAATTGAATAATCGGCAGATTGCTCGTCAGATATCGGTA
TTGCCACAAGTACAGACCAATCCTGAAGGCTTGACTGTCAGACAGTTGGTTGAGTATGGCAGAACGCCCTATGTCTCACA
TTGGGGTAAGTTGAGCGCGACAGACAACCAGATAGTAGATAGCGTTATAAATGAGATGTCTATTCAATCTCTAGCTGAGA
CATCACTTGAAGCCTTATCTGGCGGTCAACAGCAGCGCGCTTGGCTCGCGATGGTTTTAGCGCAGGATACGGATATTATC
ATGCTGGATGAACCAACTACCTATCTAGATATCTCTTACCAAATAGAGCTGATGCGACTCATACGAGAATTAAAAGACAA
CGGCAAAAGCATTATAGTTGTGCTCCATGACCTCAACCAAGCAGCGAGATATTGTGATTTATTGGTGGTGCTAAAGTCGG
GCGAACTGCAAATAATGGGCACCCCTTGTGAGGTGGTGACGGAGGGAATGCTTGCTGATATATTTGACGTGCAAGCCAAA
GTGATTACAGACCCTGTAGCAGGTTCACCCATGTGTGTGTATTTATAG

Protein sequence : 
MLSVNELQLGYHGGQTVIKNLSLELPENKVIGLIGPNGCGKSTLLKGLCRLIQPQSGRILLRQQDMAQLNNRQIARQISV
LPQVQTNPEGLTVRQLVEYGRTPYVSHWGKLSATDNQIVDSVINEMSIQSLAETSLEALSGGQQQRAWLAMVLAQDTDII
MLDEPTTYLDISYQIELMRLIRELKDNGKSIIVVLHDLNQAARYCDLLVVLKSGELQIMGTPCEVVTEGMLADIFDVQAK
VITDPVAGSPMCVYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-65 53
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-52 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-50 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-50 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-49 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-49 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcryo_1285 YP_580550.1 ABC transporter-like protein BAC0164 Protein 3e-65 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcryo_1285 YP_580550.1 ABC transporter-like protein VFG1042 Protein 2e-65 53
Pcryo_1285 YP_580550.1 ABC transporter-like protein VFG0925 Protein 1e-50 44