Gene Information

Name : Nham_0905 (Nham_0905)
Accession : YP_576224.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 998684 - 999415 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGCCGCTGGTCCGAACCGCTGGAATTTCAAAACACTATCCCTCCGGAGGGACGATCGTTTGCGCAGTATCAAACGT
GTCGCTCACGATCGGGCACGGCGAGCTTGTGGCAATTCGCGGCCGCTCGGGTTCGGGAAAGTCGACCCTGATGAACCTTT
TGGGTCTTTTGGATCGGCCGGATTGCGGTGAATATGCGCTCAACGGTCGAGAAGTCGCGAAGCTGAGCGAGGACGGACGC
GCGGCCATCAGGAGCCACGACATCGGCTTCGTATTCCAACTGCCGGCCCTTCTGCCGCGAGCAACCGCGCTGGAAAATGT
CGAGCTTCCGCTCGTTTATGCTGGCGTTCCTCCCTCCAGAAGACGTCGCGCAGCCAAAGATGCGCTTGACCGCGTAGGCT
TGGCCAACCGGGGTCATCATTGGCCAAATCAACTCTCAGGAGGAGAGCAGCAGCGGGTGGTCATTGCCCGTGCGACGGTG
AGCGATCCCGCTCTCATCCTGGCCGACGAACCGACCGGTTCACTGGACAGCAGCACCAGCGATGAGATTCTGTCGCTATT
CGAGACACTTCATCGCGATGGTCGCACGATCATCGTGGTTACGCACGCCACCGAGGTCGCCGATCGCGCGCGGCGACAGA
TCATCCTGCACGATGGACGTATCATCAAGGACACTGCGGCACCGGACAAGAATTTGCTTCCGAACGGCATCGTTTTGGAT
TCTTCCCGATGA

Protein sequence : 
MVPLVRTAGISKHYPSGGTIVCAVSNVSLTIGHGELVAIRGRSGSGKSTLMNLLGLLDRPDCGEYALNGREVAKLSEDGR
AAIRSHDIGFVFQLPALLPRATALENVELPLVYAGVPPSRRRRAAKDALDRVGLANRGHHWPNQLSGGEQQRVVIARATV
SDPALILADEPTGSLDSSTSDEILSLFETLHRDGRTIIVVTHATEVADRARRQIILHDGRIIKDTAAPDKNLLPNGIVLD
SSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_0905 YP_576224.1 ABC transporter NC_008702.1.4606598. Protein 1e-43 52
Nham_0905 YP_576224.1 ABC transporter NC_012469.1.7686878. Protein 1e-51 51
Nham_0905 YP_576224.1 ABC transporter NC_012469.1.7686946. Protein 6e-30 44
Nham_0905 YP_576224.1 ABC transporter NC_012469.1.7685735. Protein 2e-30 44