Gene Information

Name : Nham_0549 (Nham_0549)
Accession : YP_575899.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 607262 - 607786 bp
Length : 525 bp
Strand : +
Note : -

DNA sequence :
ATGGTGATGGCCGGGCTGGAACGTCCCGATAGCGGAGAGGTAGTGGTCGACGGCACCGCTTTCAATGCTCTCGACGAAGA
CGCTCTGGCGCGATTCCGCGGCCGCCACGTCGGCATCGTGTTCCAGTCCTTTCATCTGATTCCGACCATGACGGCGCTGG
AGAACGTCGCGGTGCCGCTCGAACTTGCAGGCATTGTCGACGCATCAAAGCGCGCCGCGCGCGAACTGGAGACTGTGGGT
CTCGGCGAGCGGCTGCATCATTATCCGGCCCAGTTGTCGGGCGGCGAGCAGCAGCGCGTGGCGCTGGCGCGAGCGCTCGC
GCCCGATCCTGCGATTCTCGTTGCCGACGAGCCGACCGGCAATCTGGACGAGGCGACCGGTCAGCAGATCGTCGATCTTC
TGTTCACCAAGCATGCCGAGCGTAGCATGACGCTGGTGCTGGTTACGCACGATATCGCGCTCGCGCAACGCTGCGACCGC
GTGGTGAGGCTGCGCTCGGGACGCATCGACGGAGCGGCTCGATGA

Protein sequence :
MVMAGLERPDSGEVVVDGTAFNALDEDALARFRGRHVGIVFQSFHLIPTMTALENVAVPLELAGIVDASKRAARELETVG
LGERLHHYPAQLSGGEQQRVALARALAPDPAILVADEPTGNLDEATGQQIVDLLFTKHAERSMTLVLVTHDIALAQRCDR
VVRLRSGRIDGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-22 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_0549 YP_575899.1 ABC transporter NC_012469.1.7686878. Protein 1e-29 43