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Name : Nham_3923 (Nham_3923) Accession : YP_579071.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4301955 - 4303454 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGCTGGTCGTGGAGACGATTGCGAAGATCCGTCGCGCGTATTTCGTTCACGGTCAGCCGATCAAGGCGATATGCCGTGA TCTCGGTGTTTCCCGGAAGGTGGTGCGGAAGGTCATCCGTTCGGAGGCGACTGAGTTCCGCTACGAGCGGGAAGCGCAGC CGCTTCCGAGGATCGGACCCTGGAGCGACAAGCTCGATCAGTTGCTGGTTGCGAATGAAGGTAAGGCGTCGCGCGAGCGC CTGACGCTGATCCGCCTGTTCGAGGAACTGCGTGGCTGCGGTTATGCCGGGGGCTACGATGCCGTACGGCGCTACGCCCG ACGGTGGAGCAAGGAGCGGGGCGCCACGACGGCCGCGGCCTATGTGCCGCTGAGCTTCGCGCCGGGTGAAGCCTACCAGT TCGACTGGAGCCACGAGGTCGTCCTGCTGAACGGCGCGACGGTGACCGTGAAGGTGGCGCACGTCCGGCTCTGCCATAGC CGCATGCTGTTCGTGCGAGCTTATCCGCGCGAGACGCAGGAGATGGTGTTCGACGCCCACGACCGGGCATTCGCCCTGTT CAAGGGCACCTGCCAGCGCGGCATCTACGACAACATGAAGACGGCGGTGACGACCATCCTCGTCGGCAAAGAGCGTCTCT ACAATCGACGGTTCCTGCAGATGTGCAGCCATTACCTGGTCGATCCGGTCGCCTGCACGCCGGCATCCGGCTGGGAGAAG GGACAGGTCGAGAACCAGGTCGGGCTGGTCCGTGAGCGCTTCTTCACGCCGCGATTGCGGTTCAAAAACTATGATGAGTT GAACGCCTGGCTGCTCGATAAATGCATCGCCTACGCCAAGGCGCACCGCCATCCAGAACTGACCGAGCAGACAGTGTGGG AGGTGTTTGAGGCGGAACGGCCAAAGCTCGTTCCCTATGCCGGCCGGTTCGATGGATTCCACGCAGTGCCGGCATCGGTC TCGAAGACCTGCCTGGTGCGCTTCGACAACAACAAATACTCGGTGGCTGCGAGCGCGGTTGGGCGTCCGGTCGAGGTGCA TGCCTATGCCGACCGCATTGTAATCCGCCAGGACGGGCGCATCGTTGCCGAGCATCCTCGCTCCTTCGGCCGCGGCGAGA CGACCTACGATCCCTGGCATTACGTGCCTGTCCTGGCCCGCAAGCCCGGCGCCTTGCGCAACGGTGCTCCCTTCAAGGAT TGGGTGCTGCCGGCCGCGATGGAACGTGTGCGGCGCAAGCTCGCGGGCGCCGCCGACGGCAACCGGCAGATGGTCGATAT CCTCAACGCGGTGCTGACCGACGGCTTGCCCGCCGTCGAGGCTGCCTGCGCCGAGGCGCTCTCCCACGGCGTCCATTCCG CCGATGTCGTTCTCAACATCCTGGCTCGCCAGCGCGATCCGGCGCCACCAGGCAACATCCTCACACCGGATGCGCTGAAG CTACGTCATGCACCCATCGCCGATTGTGCCCGTTACGACAACCTCAGGAGAACGGTCTGA Protein sequence : MLVVETIAKIRRAYFVHGQPIKAICRDLGVSRKVVRKVIRSEATEFRYEREAQPLPRIGPWSDKLDQLLVANEGKASRER LTLIRLFEELRGCGYAGGYDAVRRYARRWSKERGATTAAAYVPLSFAPGEAYQFDWSHEVVLLNGATVTVKVAHVRLCHS RMLFVRAYPRETQEMVFDAHDRAFALFKGTCQRGIYDNMKTAVTTILVGKERLYNRRFLQMCSHYLVDPVACTPASGWEK GQVENQVGLVRERFFTPRLRFKNYDELNAWLLDKCIAYAKAHRHPELTEQTVWEVFEAERPKLVPYAGRFDGFHAVPASV SKTCLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRIVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKD WVLPAAMERVRRKLAGAADGNRQMVDILNAVLTDGLPAVEAACAEALSHGVHSADVVLNILARQRDPAPPGNILTPDALK LRHAPIADCARYDNLRRTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 2e-108 | 49 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-81 | 42 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-83 | 42 |
