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Name : Nham_3914 (Nham_3914) Accession : YP_579063.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4292342 - 4293841 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGCTGATCGTGGAGACGATTGCGCGGATACGCCGCGAGCACTTCATCAAGGGCAAGACGATCAAGGAGATCGCACGCGA CCTGAAGGTGTCGCGGAACACGGTCCGCAAGGTGTTGCGGTCTGGGGAGACCTCATTCGAGTACGAACGTGCGGTGCAGC CGCGGCCGAAGCTGGGGCGATGGGCCGCTGATCTCGACGGATTGCTGGCGTCGAACGCGGCGAAGTCCGCTCGCGAACAG CTGACGCTGATCCGGGTCTTCGAAGAGCTTCGCGGGCGCGGCTATGACGGCGGCTACGATGCTGTGCGACGTTACGCCAG ACGGTGGAGCCAGGAGCGCGGACAATCGACGGCGGCGGCCTATGTCCCGCTGAGCTTTGCACCGGGAGAAGCCTACCAGT TCGACTGGAGCCATGAGGTTGTCCTGCTGCATGGCGTGACGGTGATCGTGAAGGTCGCTCATGTCCGGCTCTGTCACAGC CGGATGCTGTTCGCTCGCGCCTATCCACGCGAGACGCAGGAGATGGTGTTCGACGCCCACGACCGGGCCTTCGCTCTGTT CAAGGGCACCTGCGGCCGCGGCATCTACGACAATATGAAGACCGCGGTGGAGACGATCTTCGTCGGCAAAGGGCGTCTCT ACAATCGCCGCTTCATGCAGATGTGCAGCCATTACCTGGTCGATCCGGTCGCCTGCACGCCGGCCTCAGGCTGGGAGAAG GGCCAGGTTGAGAACCAGGTTGGGCTGGTCCGGGAGCGCTTCTTCACGCCGCGGCTGCGGTTCAAAACCCTCGACGAGTT GAACGCCTGGCTGCTGGATAAGTGCATCGCCTACGCCAAGGCGCACCGTCATCCGGAACTGACCGAACAGACGGTCTGGG AAGTGTTCGAAGCCGAGCGGCCGAAGCTCGTTCCCTATGCCGGCCGGTTCGATGGATTCCATGCCGTGCCGGCATCCGTC TCGAAGACCTGCCTGGTGCGCTTCGACAACAACAAATACTCGGTTACGGCCAACGCCGTCGGGCGGCCCGTCGAAGTGCA AGCTTATGCCGACCGCATCGTGATCCGCCAGGACGGACGCATCGTCGCCGAGCATCCGCGTTCATTCGGCCGCGGCGAGA CGACCTACGATCCCTGGCATTATGTGCCGGTGCTGGCTCGCAAACCCGGCGCGTTGCGCAACGGCGCCCCGTTCAAGGAC TGGGTGCTGCCGGCCGCGATCGAGCGTGTGCGGCGCAAGCTCGCCGGTGCCGACGATGGCAATCGGCAGATGGTCGACAT CCTCAACGCGGTGCTGACCGACGGACTGCCGGCAGTCGAGGCCGCCTGTGCCGAGGCGATCGCCCACAGTGTCCATTCCG CCGATGTCGTTCTCAACATCCTCGCCCGCCAGCGTGAGCCGGCGCCACCAGCCAACATCCTCACCCCGGCGGCGCTGACC TTGCGCCATGCGCCGATCGCTGACTGTGCCCGTTACGACAACCTCAGGAGACCGGTCTGA Protein sequence : MLIVETIARIRREHFIKGKTIKEIARDLKVSRNTVRKVLRSGETSFEYERAVQPRPKLGRWAADLDGLLASNAAKSAREQ LTLIRVFEELRGRGYDGGYDAVRRYARRWSQERGQSTAAAYVPLSFAPGEAYQFDWSHEVVLLHGVTVIVKVAHVRLCHS RMLFARAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKGRLYNRRFMQMCSHYLVDPVACTPASGWEK GQVENQVGLVRERFFTPRLRFKTLDELNAWLLDKCIAYAKAHRHPELTEQTVWEVFEAERPKLVPYAGRFDGFHAVPASV SKTCLVRFDNNKYSVTANAVGRPVEVQAYADRIVIRQDGRIVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKD WVLPAAIERVRRKLAGADDGNRQMVDILNAVLTDGLPAVEAACAEAIAHSVHSADVVLNILARQREPAPPANILTPAALT LRHAPIADCARYDNLRRPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-107 | 49 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 2e-81 | 42 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-82 | 41 |
