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Name : Nham_0382 (Nham_0382) Accession : YP_575733.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 422969 - 424600 bp Length : 1632 bp Strand : + Note : - DNA sequence : ATGGGCGCCATCGATCAGCCGCTACTCGACGTTCGTGACCTGTCCGTTGCGTTTCACCATGGCAGCGGACCATCGGTTGC CGTCGATCGCATTTCGTTCGAGATCAAACGCGGCGAGTGCGTGGCGCTGGTCGGCGAATCCGGCTCTGGAAAATCCGTCA GCGCGCTCTCGATCCTGAAGCTGCTGCCCTATCCGGCTGCGTCGCACCCCAGCGGCAATATCCGCTTCAAAGGCCGTGAG CTGCTCGGCATGTCCGAGCGCGAGATCAGGAGCATTCGCGGCAACGACATCTCGATCATCTTTCAGGAGCCGATGACCTC GCTCAATCCGCTGCACACCGTCGAAGCGCAGATCAGCGAGATAATGCTGCTGCACGGCGGGGTTCGCGGCGCGGCGGCGC GGCAGCGGACCCTGGAACTGCTGACACAAGTCGGCATTCCCGATCCGGAAACCCGCCTCGCCAGCTATCCGCATCAATTG TCCGGCGGCCAGCGCCAGCGCGTCATGATCGCAATGGCGCTCGCCAACGAACCCGACCTTCTGATCGCGGACGAGCCGAC CACCGCGCTCGACGTCACCGTGCAGGCGCAAATCCTGGCGCTATTGGCGGATATTCGCGCCCGGCTCGGAATGAGTCTGT TGTTCATCACCCACGATCTCGGCATCGTCCGCCGCATCGCCGACCGTGTTTGCGTCATGAACGGCGGCAAGATCGTCGAG AAGGGACCGGTCGAGCAGGTCTTTGAAGAGCCGCGCCATCCCTACACGCGCGAGCTTTTGGCCGCCGAGCCGAAGCCCGA CCCTGCGCCGCCGCGGCCGGAGTCTCCGGTCGTGATCGCAGCCGACGATCTCAAGGTCTGGTTTCCGATCCGGCGCGGCC TGTTGCGCAAGACGGTCGGCCACATCAAGGCGGTCGACGGCGTGACGCTGAAGGTGCGCAAGGGCGAAACGCTCGGCGTC GTCGGCGAATCCGGGTCCGGCAAGACCACGCTGGGGCTGGCGCTGTTGCGGTTGATCTCGTCCGATGGCCCGATCGTGTT CCTGAGCAAGAACATCCAGGGTCTGCGTTTCAAGGCGATGCGGCCGTTCCGCCGCGACATGCAGATCGTGTTTCAGGACC CGTTCGGGGCGTTGAGTCCGCGAATGTCGGTCGGCGATATCGTGGCCGAGGGCTTGAGCGTGCATCAGCGATCGCTTTCG GACACTGAGCGCGAGGCGCGGGTGGTCAAGGCGCTGAAAGATGTCGGGCTCGATCCTGCAACGCGCTTTCGCTATCCGCA CGAATTCTCCGGGGGCCAGCGCCAGCGCATCAGTATCGCGCGCGCCGTGGTGCTGGAGCCGAATTTCGTCGTGCTGGACG AACCGACCAGTGCGCTCGACATGCTGTTCCAGGCGCAGATGGTCGATCTCTTGCGCGACCTGCAGCGCAAGCGCGACCTG ACCTATATGTTCATCTCGCACGATCTGCGCGTGGTCGCCTCTCTTGCCAGCCATCTCATCGTGATGCGGCACGGCAAGGT GGTCGAGGAAGGGCCGGCGTCGCACCTGTTCAAGAATCCGAAATCGGATTACACGCGCGCGCTGTTTGCTGCCGCTTTCC GGCTGGAGACCGCGCCGGGCGAATCGAAATAA Protein sequence : MGAIDQPLLDVRDLSVAFHHGSGPSVAVDRISFEIKRGECVALVGESGSGKSVSALSILKLLPYPAASHPSGNIRFKGRE LLGMSEREIRSIRGNDISIIFQEPMTSLNPLHTVEAQISEIMLLHGGVRGAAARQRTLELLTQVGIPDPETRLASYPHQL SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSLLFITHDLGIVRRIADRVCVMNGGKIVE KGPVEQVFEEPRHPYTRELLAAEPKPDPAPPRPESPVVIAADDLKVWFPIRRGLLRKTVGHIKAVDGVTLKVRKGETLGV VGESGSGKTTLGLALLRLISSDGPIVFLSKNIQGLRFKAMRPFRRDMQIVFQDPFGALSPRMSVGDIVAEGLSVHQRSLS DTEREARVVKALKDVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFVVLDEPTSALDMLFQAQMVDLLRDLQRKRDL TYMFISHDLRVVASLASHLIVMRHGKVVEEGPASHLFKNPKSDYTRALFAAAFRLETAPGESK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-79 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-88 | 42 |
