Gene Information

Name : Nham_0346 (Nham_0346)
Accession : YP_575702.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 377806 - 378489 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGTGTGTCCCGACACCCTCAAAAGCACCGATGCTGGATGTCCAGAACCTGACCAAAACCTATCGTTCGGCGCAGGAACG
GATCACCGTTCTTCGCGGCGCCTGCCTGCGCGTTGACGCCGGCGAGAGTGTCGCGCTGACGGGCGAGTCGGGAAGCGGCA
AAAGCACCTTGCTGCACCTGATCGCGGGCCTCGATCAGGCGGACGGCGGTTCCATCCGGCTCAATGAGACGGAGGTGACT
GCACTGGCGGACCGGGGCCGTGCAGCGCTGCGCCGGGACCGGTTGGGACTGGTTTTTCAACAATTCAACCTGATCCCCTC
TCTCACCGTCGCCGACAACCTGGCTTTTCAGTCGCGTATCGCCGGGCGTCACAACAGCCAGTGGCAAAGCGAACTTGTCG
ATCGGCTGGGGCTCGGCGATTTGCTGAACCGATATCCCGAACAACTCTCAGGCGGCCAACAGCAGCGGGTTGCAATCGGG
CGCGCGCTCGCGGTCAGGCCGCCTCTGCTCCTCGCCGACGAACCGACCGGCAACCTCGATGAAGCGACGGCCGACGAGGT
CATGGATCTCGCGCGCGATCTCATCAAGCGAACCGGATGCAGTTTCCTGATGGTCACGCACAGCGCGCGGCTTGCCGCGA
CGCTGGACCGGCAAGTCCTGCTCAGCGCCGGGCTGATCTCGTGA

Protein sequence : 
MCVPTPSKAPMLDVQNLTKTYRSAQERITVLRGACLRVDAGESVALTGESGSGKSTLLHLIAGLDQADGGSIRLNETEVT
ALADRGRAALRRDRLGLVFQQFNLIPSLTVADNLAFQSRIAGRHNSQWQSELVDRLGLGDLLNRYPEQLSGGQQQRVAIG
RALAVRPPLLLADEPTGNLDEATADEVMDLARDLIKRTGCSFLMVTHSARLAATLDRQVLLSAGLIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_0346 YP_575702.1 ABC transporter CP001581.1.gene798.p Protein 6e-27 41