|
Name : Nham_2896 (Nham_2896) Accession : YP_578124.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3188833 - 3190764 bp Length : 1932 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACATCCGCTCCAATCCGGACACCACGCGCCCCGCCGTCACCACCGGCGCCCTGCCCTCCTCCCGCAAGATTTTCTC GGTGCCCGAGGCCGCACCCGACCTGCTCGTGCCGCTGCGCGAGATCGTCCTGAGCGAAGGCGCGGGCGAACCGAACCTGC CGGTCTACGACACATCGGGACCCTATACCGACCCGGACGTCACCATCGACGTCAATGCCGGTCTGCCGCGCACGCGCCTT GCCTGGGTGAAGGAACGCGGCGGCGTCGAGGAATACGACGGCCGCGTCATCAAGCCCGAGGACAACGGCAATGTCGGCGC GTCCCACGCCGCGACCGCGTTCAAGGCGCATCACAAGCCGCTGCGTGGTGTCGGCGATGCGCCGATCACCCAACTCGAAT TCGCACGCGCAGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAACATCGGGCGCAAGCAGCAACTCGAA CGCGCCGAAGCCGCGCTGGCCGACGGCGAAAGCTTCGGCGCTGCGGTGCCCACCTTCATCACGCCGGAATTCGTGCGCGA GGAGATCGCGCGCGGCCGCGCCATCATCCCGGCCAACATCAACCACGCCGAGCTTGAGCCGATGATCATCGGCCGTAATT TTCTGGTGAAGATCAACGCCAACATCGGCAACAGCGCGGTGACCTCCTCCGTCGAGGAGGAGGTGGATAAGATGGTGTGG GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCGACGGGACGCAACATCCACACCACGCGCGAATGGATCTTGCG CAATTCGCCAGTACCTATTGGCACCGTGCCGATCTATCAGGCACTGGAGAAGTGCGACGGCGATCCGGTCAAGCTGACGT GGGAGCTTTACCGCGACACGCTGGTGGAGCAGTGCGAACAGGGCGTCGATTACTTCACCATCCACGCCGGCGTGCGCCTG CCCTACATCCACCTCACCGCCGACCGCGTCACCGGCATCGTCTCGCGCGGCGGATCGATCATGGCGAAGTGGTGCCTCGC CCACCACAAGGAGAGCTTCCTCTACACCCACTTCGAGGAGATCTGCGATCTCATGCGCAAGTATGACGTGTCGTTCTCGC TGGGCGACGGCCTGCGCCCGGGCTCGATCGCCGACGCCAACGACCGCGCCCAGTTCGCGGAACTGGAAACGCTCGGCGAG CTGACGCAGATCGCGTGGAACAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT CAACATGGACAAGCAGCTCAAAGAGTGCGGCGAAGCGCCGTTCTATACGCTGGGCCCGCTGACCACCGACATCGCGCCGG GCTACGACCACATCACATCAGGCATCGGCGCCGCCATGATCGGCTGGTTCGGCTGCGCGATGCTCTGTTATGTTACGCCG AAGGAGCATCTCGGGCTGCCGAACCGCGACGACGTCAAGACCGGCGTCATCACCTATCGCGTCGCGGCGCACGCCGCCGA TCTTGCCAAGGGCCATCCGGCTGCGCAACTGCGCGATGACGCACTGAGCCGCGCGCGGTTCGATTTCCGCTGGCAGGATC AGTTCAACCTCGGCCTCGATCCGGAGACGGCGGTGGCCTTCCATGACGAGACGCTGCCGAAGGAGGCGCACAAGGTCGCG CATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGACGTGCGCGACTACGCCGCCACACTGGG CGACAACGAGAAGGCGGCGCTTTATCCCGAGGGCAGCAAACTCGCCAGCGGCATGACGATGAAAGGCGTCATTGAAGACG GCATGACGCAGATGAGCGAGAAGTTCAAGGAGATGGGCGGACAGGTTTATGTCGAAGCGGAAGCCGTGAAGGAAAGCAAC AAGGTGTTGTGA Protein sequence : MNIRSNPDTTRPAVTTGALPSSRKIFSVPEAAPDLLVPLREIVLSEGAGEPNLPVYDTSGPYTDPDVTIDVNAGLPRTRL AWVKERGGVEEYDGRVIKPEDNGNVGASHAATAFKAHHKPLRGVGDAPITQLEFARAGIITKEMIYVAERENIGRKQQLE RAEAALADGESFGAAVPTFITPEFVREEIARGRAIIPANINHAELEPMIIGRNFLVKINANIGNSAVTSSVEEEVDKMVW AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYRDTLVEQCEQGVDYFTIHAGVRL PYIHLTADRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTQIAWNKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPNRDDVKTGVITYRVAAHAADLAKGHPAAQLRDDALSRARFDFRWQDQFNLGLDPETAVAFHDETLPKEAHKVA HFCSMCGPKFCSMKITQDVRDYAATLGDNEKAALYPEGSKLASGMTMKGVIEDGMTQMSEKFKEMGGQVYVEAEAVKESN KVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 64 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 64 |
