Gene Information

Name : Nham_1885 (Nham_1885)
Accession : YP_577155.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2097048 - 2097713 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTGCTTGTTGTCGAGGACGACCAGCGGATCGCGGCGGATGTCTCACGCACGCTCGAAGCGTCCGGTTACGTGGT
TGAAACGGTTGCGAACGGCGAGGACGCTTGGTTCCTTGGCGACACCGAGGACTATGGCGCCGTCATTCTCGATCTTGGCT
TACCCGGGATGGATGGCCTCGCGGTTTTGAAGCGCTGGCGCGCCAATGGACGCCACATGCCTGTCCTCGTTCTCACTGCG
CGAGGAAGCTGGGCCGAGCGGGTGGACGGGATCGACGCTGGCGCCGACGATTACTTGCCGAAACCATTCCGGATGGAGGA
GTTGCTGGCGCGGCTGCGGTCCATCGTGCGGCGCTCAGCGGGGCATGGTTCCTCGGTTATGACCGCGGGCGAGATCACCC
TGGACGAGCGGCAGATGAAGGTGACCCGACGAGGCGTGCCGATTGCGCTTTCGCCGCTTGAGTACCGGCTTATCGCTCAT
CTCCTGCGGAATCGAGGGCGGGTCGTCTCGCAGCAGGAGCTCGACGAGAACATCTACGGTCACGGCGAAGAGCACGACTC
CAACACGCTCGAGGTGCTGGTCGGCCGCGTACGCAAGAAGCTCGGCGCCGATGTGATCGAAACGCGGCGCGGCTTCGGCT
ATCTGATGCCGGAGGCCCCGGCATGA

Protein sequence : 
MRVLVVEDDQRIAADVSRTLEASGYVVETVANGEDAWFLGDTEDYGAVILDLGLPGMDGLAVLKRWRANGRHMPVLVLTA
RGSWAERVDGIDAGADDYLPKPFRMEELLARLRSIVRRSAGHGSSVMTAGEITLDERQMKVTRRGVPIALSPLEYRLIAH
LLRNRGRVVSQQELDENIYGHGEEHDSNTLEVLVGRVRKKLGADVIETRRGFGYLMPEAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_1885 YP_577155.1 two component transcriptional regulator CP000647.1.gene1136. Protein 1e-38 42
Nham_1885 YP_577155.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-41 42
Nham_1885 YP_577155.1 two component transcriptional regulator BAC0487 Protein 6e-38 42
Nham_1885 YP_577155.1 two component transcriptional regulator BAC0530 Protein 1e-38 42
Nham_1885 YP_577155.1 two component transcriptional regulator CP001138.1.gene1939. Protein 7e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_1885 YP_577155.1 two component transcriptional regulator VFG1390 Protein 2e-32 41
Nham_1885 YP_577155.1 two component transcriptional regulator VFG0475 Protein 7e-38 41