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Name : Nham_1791 (Nham_1791) Accession : YP_577065.1 Strain : Nitrobacter hamburgensis X14 Genome accession: NC_007964 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1991865 - 1993277 bp Length : 1413 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCAAAGCGATCCGCGACAACCCCGCAGCCTTCGATGCCGCGCTGAAGCGGCGGGGGCTTGCGCCGCTGTC GTCGTCACTGCTCGCAATCGACGAGAAACGCCGCGCTGCGATTCTGGCGTCGGAGCAGGCGCAGGCGCGCCGCAACGCGG CTTCGAAGGAAATCGGCGAGGCCAAGAAGGCGAAGGACGAGGCGCGCGCCGCGAAGCTGATGGCGGAAGTCGCCGAACTC AAGACCTCCATGCCCGAGATGGACGCGGCGGCGAAAGCGGCCGACGAGAAGCTGAGAAAGGCGCTTGCCGAAATTCCGAA CCTGCCGCTCGACGAGGTGCCCGATGGTACTGATGAGCACGGCAACATCCAGCATCATGTGTTCGGCAAGAAACGCGACT ATGCGTTTACGCCGAAGCCGCATGAGGATCTCGGCGGCGCGCTCGGCGACATGGATTTCGAGGCGGCGGCAAAATTGTCC GGCGCGCGCTTCGTGGTGCTGAAGCGGGGACTGGCGCGGCTCGAACGCGCCATCGGACAATTCTTCCTCGACGTCCACAC TGGCGAGCACGGTTATACCGAGGTCAATCCACCGCTTCTGGTGCGTGATGACGCCATGTTCGGCACAGCCCAGTTGCCGA AGTTTGCAGAGGATCAGTTTGATTTCATTAAAGACAGGACGATCTCCGAGCAACTTGAGCAAACAGTTGTCGAAATAGAT CAGAGGAAGGTTAGGCCTGGTCATTTCGACATGGAGCAAAAGGTTACCCCGCTGTCGGCTCCAACACGCAAAGACAGACT TTGGCTCATCCCCACCGCCGAAGTCCCGCTCACCAACCTCGTTCGCGAATCCATCCTCGATGAAAAAGAACTGCCGCTGC GCTTCACCGCGCTGACGCCGTGTTTTCGCGCCGAAGCGGGCGCCGCCGGGCGCGACACCCGCGGCATGATCCGCCAGCAC CAATTCACCAAGGTCGAACTGGTCTCGATCACGACGCCGGAAACATCCAAGGACGAACACGAGCGGATGCTCTCCTGCGC CGAGGAAGTGCTGCGCCGGCTCGACCTGCATTACCGCGTGATGACGCTGTGCACCGGCGACATGGGCTTTGCCTCGCAAA AGACCTATGACATCGAGGTGTGGATGCCGGGACAGGGTGAGGGCGGTGCCTACCGAGAGATTTCGTCCTGCTCGGTGTGC GGCGATTTCCAGGCGCGGCGCATGGACGCGCGCTCGCGTGGCCCCGACGGCAAGCCACGCTTCGTTCATACGCTGAATGG CTCCGGCACCGCGGTCGGCCGCGCCCTGATCGCCGTGATGGAGACCTATCAGCAGGCCGATGGCTCCATCGCCGTGCCCG ACGTGCTTTTGCCCTACATGGGCGGCCTCAAGGTGATTGCGAAAGGCTTGTAG Protein sequence : MHDIKAIRDNPAAFDAALKRRGLAPLSSSLLAIDEKRRAAILASEQAQARRNAASKEIGEAKKAKDEARAAKLMAEVAEL KTSMPEMDAAAKAADEKLRKALAEIPNLPLDEVPDGTDEHGNIQHHVFGKKRDYAFTPKPHEDLGGALGDMDFEAAAKLS GARFVVLKRGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFAEDQFDFIKDRTISEQLEQTVVEID QRKVRPGHFDMEQKVTPLSAPTRKDRLWLIPTAEVPLTNLVRESILDEKELPLRFTALTPCFRAEAGAAGRDTRGMIRQH QFTKVELVSITTPETSKDEHERMLSCAEEVLRRLDLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREISSCSVC GDFQARRMDARSRGPDGKPRFVHTLNGSGTAVGRALIAVMETYQQADGSIAVPDVLLPYMGGLKVIAKGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-81 | 46 |
