Gene Information

Name : rph (Nham_0151)
Accession : YP_575512.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 170161 - 170874 bp
Length : 714 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGACCTAGCCGTCGTGCACCGGATGAACTGCGCGCCGTGTCGCTGGAACGTGGCGTCGTCAAATACGCCGAGGGTTC
CTGCATGGTGAAATTCGGCGACACCCACGTGCTGGTGACCGCGACCCTGGAGGAGCGGCTGCCGCCGTGGCTCAAGGGCC
AGGGCCGCGGCTGGGTCACGGCCGAATACGGAATGCTGCCGCGCGCCACGCTGGAGCGGACGCGGCGCGAGGCCTCCGCC
GGCAAGCAGGGCGGCCGTACCGTCGAAATCCAGCGCCTGATCGGCCGCTCGTTGCGCGCCGCAGTCGACCTCGAGGCGCT
GGGCGAGCGCCAGATCACGGTGGATTGCGATGTGATTCAGGCCGACGGCGGCACCCGCACCGCGTCGATCACCGGCGCGT
GGGTCGCGCTGGCCGACTGCATCGGCTGGATGAAGGCCCGCAACATGATCAAGACCAGCGTGCTTCGCGACAACGTCGCG
GCGGTCTCATGCGGCATCTACAACGGCACGCCCGTCCTCGATCTGGACTATGCGGAGGATTCAGAAGCCGACACCGACGC
CAATTTCGTCATGACCGGCGACGGACGCATCATCGAGGTGCAGGGAACCGCCGAGAAGACACCGTTCTCGCAGGATGAAT
TTCTCGCGCTGCTGGCGCTCGCGAAAAAAGGGGTCGCGCGGCTGGTGGATTTGCAGAAAATGGCGGTGGCGTGA

Protein sequence :
MRPSRRAPDELRAVSLERGVVKYAEGSCMVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREASA
GKQGGRTVEIQRLIGRSLRAAVDLEALGERQITVDCDVIQADGGTRTASITGAWVALADCIGWMKARNMIKTSVLRDNVA
AVSCGIYNGTPVLDLDYAEDSEADTDANFVMTGDGRIIEVQGTAEKTPFSQDEFLALLALAKKGVARLVDLQKMAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-47 50