Gene Information

Name : Nham_1433 (Nham_1433)
Accession : YP_576715.1
Strain : Nitrobacter hamburgensis X14
Genome accession: NC_007964
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1615714 - 1616385 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
TTGCGCCTTCTCGTCGTCGAAGACGATCCCGACCTTAATCGTCAGCTCACGACGGCGCTGACCGACGCCGGCTATGTGGT
CGACCGTGCGTTCGACGGCGAGGAGGGACATTTCCTCGGCGACAGCGAGCCGTATGACGCCGTCGTGCTGGATATCGGCC
TGCCGAAGATGGACGGTATTTCGGTGCTGGAGGCCTGGCGGCGCAATGACCGCACCATGCCGGTGCTGATCCTCACAGCG
CGCGATCGCTGGAGCGACAAGGTGCAGGGGTTCGACGCCGGCGCCGACGATTATGTCGCAAAACCCTTCCATCTCGAGGA
GATCCTGGCGCGGATTCGCGCGCTGCTGCGGCGGAGCACCGGACATGCGCAATCTGAGTTGTCCTGCGGGCCGGTGACGC
TGGATACCCGCACCGGGCGCGTCAGCGTCAGCGGCAATCCGGTCAAGATGACATCGCATGAATACCGGCTGCTGGCCTAT
CTCATGCATCATACCGGGAGGGTGGTGTCGCGCACCGAACTGGTCGAACATCTCTACGATCAGGATTTCGATCGCGACTC
CAACACCATTGAGGTCTTTGTCGGCCGCATCCGCAAGAAGCTGGACGTCGATATCATCCAGACGGTCCGCGGGCTCGGCT
ACCTGCTGACGCCGCCGACAGATGCGCGCTAG

Protein sequence : 
MRLLVVEDDPDLNRQLTTALTDAGYVVDRAFDGEEGHFLGDSEPYDAVVLDIGLPKMDGISVLEAWRRNDRTMPVLILTA
RDRWSDKVQGFDAGADDYVAKPFHLEEILARIRALLRRSTGHAQSELSCGPVTLDTRTGRVSVSGNPVKMTSHEYRLLAY
LMHHTGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKKLDVDIIQTVRGLGYLLTPPTDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_1433 YP_576715.1 two component transcriptional regulator NC_002516.2.879194.p Protein 5e-40 48
Nham_1433 YP_576715.1 two component transcriptional regulator CP000647.1.gene1136. Protein 2e-35 46
Nham_1433 YP_576715.1 two component transcriptional regulator CP004022.1.gene1005. Protein 5e-37 46
Nham_1433 YP_576715.1 two component transcriptional regulator BAC0530 Protein 1e-35 46
Nham_1433 YP_576715.1 two component transcriptional regulator BAC0487 Protein 6e-29 44
Nham_1433 YP_576715.1 two component transcriptional regulator CP001918.1.gene2526. Protein 3e-34 44
Nham_1433 YP_576715.1 two component transcriptional regulator CP000034.1.gene2022. Protein 4e-35 44
Nham_1433 YP_576715.1 two component transcriptional regulator NC_002695.1.913289.p Protein 1e-34 44
Nham_1433 YP_576715.1 two component transcriptional regulator CP001138.1.gene1939. Protein 4e-35 44
Nham_1433 YP_576715.1 two component transcriptional regulator BAC0111 Protein 6e-30 41
Nham_1433 YP_576715.1 two component transcriptional regulator BAC0125 Protein 8e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nham_1433 YP_576715.1 two component transcriptional regulator VFG0475 Protein 3e-35 44
Nham_1433 YP_576715.1 two component transcriptional regulator VFG1390 Protein 2e-25 42
Nham_1433 YP_576715.1 two component transcriptional regulator VFG0473 Protein 1e-26 41