Gene Information

Name : Csal_0892 (Csal_0892)
Accession : YP_572948.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 1003709 - 1005097 bp
Length : 1389 bp
Strand : +
Note : unwinds double stranded DNA

DNA sequence :
ATGAGCGAATACGTCGAGCACGACCAGGAAACCGCTGCCCTCAAGGTACCGCCGCACTCCCTGGAGGCCGAGCAGTCGGT
ACTGGGGGGGCTGATGCTGGAGAACAGCGCCTGGGATACCGTCTCGGAGCGTCTCTCGGCCGACGATTTCTATCGCTACG
AGCATCGACTGATCTTCAACGCCATGGCCCAGCTCGCCGATGCGGGCCATCCGCTCGACGTGGTCACGCTGTCCGAAGCG
CTGGAAAATCGCGACCAGCTGGAAAGCGTCGGCGGTCTGGCGTATCTGGCCGAACTGGCACGCAACACGCCTTCGGCGAG
CAACATCCGCGCCTATACCGATATCGTTCGCGAGCGGGCGACCCTGCGCAAGCTGATACAGGCCGCTCATCAGATCGCCG
ACGGGGCGTTCGCGCCGCAGGGGCGTCCCGCCGATGAACTGGTCAACGAAGCCGAGCGTCTGGTCTTCCAGATCAGCGAG
GATCGTCCCAAGACCGGCGGTGCGATCGGCATGAGCGATCTGCTCAGCAAGGCCGTCGATCGCATCGACGAACTGTTCAA
CATGCAGGGTGAGATGACCGGCCTGTCGACCGGCTTCCGGGATCTCGACGAGATGACCTCGGGGCTGCAGCCGTCTGACC
TGGTGATCATCGCCGGCCGGCCGTCGATGGGCAAGACGACGTTCGCCATGAACGTGGTCGAGCATGCGGTCATTTCCAGC
GACAAGCCGGTGGTGGTGTTTTCCATGGAGATGCCCGCCGATGCCCTGATGCTGCGCATGCTCTCGTCGCTGGGACGCAT
CGACCAGACCCGAGTGCGTACCGGCCAGCTCGAGGACGAGGATTGGCCACGTCTGACCTCGGCGGTCAACCTGCTCAAGG
ACAAGCAGTTGTTCATCGACGACACTGCCGGCCTCTCGCCCAACGAGATGCGGGCGCGGACGCGGCGTCTGGCACGCGAG
CACGGCAACATCGGGCTGATCATGATCGACTATCTTCAGCTCATGCAGATTCCGGGATTCTCCGAGAACCGCACCGGCGA
GATCTCGGAAATTTCGCGCTCGCTCAAGGCCCTGGCCAAGGAGTTCAATTGCCCGGTGGTGGCTCTCTCGCAGCTCAACC
GCTCGCTGGAGCAGCGTCCCAACAAGCGTCCGGTGATGTCCGACCTGCGCGAGTCGGGGGCCATCGAGCAGGATGCCGAC
CTCATTGCCTTCGTGTATCGCGACGAGGTCTATAATCCAGACAATCCCGACAACAAGGGGTTGGCCGAGTTGATCATCGG
CAAGCAGCGTAACGGGCCGATCGGTGCCGTGCACATGGCCTTCATCGGCAAGTACACCCGCTTCGAGGACCTCGCGCCGG
ATAGTTACGGCCAGCACATGGGCGAGTGA

Protein sequence :
MSEYVEHDQETAALKVPPHSLEAEQSVLGGLMLENSAWDTVSERLSADDFYRYEHRLIFNAMAQLADAGHPLDVVTLSEA
LENRDQLESVGGLAYLAELARNTPSASNIRAYTDIVRERATLRKLIQAAHQIADGAFAPQGRPADELVNEAERLVFQISE
DRPKTGGAIGMSDLLSKAVDRIDELFNMQGEMTGLSTGFRDLDEMTSGLQPSDLVIIAGRPSMGKTTFAMNVVEHAVISS
DKPVVVFSMEMPADALMLRMLSSLGRIDQTRVRTGQLEDEDWPRLTSAVNLLKDKQLFIDDTAGLSPNEMRARTRRLARE
HGNIGLIMIDYLQLMQIPGFSENRTGEISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPVMSDLRESGAIEQDAD
LIAFVYRDEVYNPDNPDNKGLAELIIGKQRNGPIGAVHMAFIGKYTRFEDLAPDSYGQHMGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-117 57
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-103 54
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-97 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 9e-99 50
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-99 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-100 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-92 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-92 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-81 45