Gene Information

Name : Csal_3212 (Csal_3212)
Accession : YP_575255.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 3580097 - 3581389 bp
Length : 1293 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTATTCACCATCATGTTCATTGGGTTGATCGTCCTGCTAATGCTGGGCGTCCCCGTTGCGTTTGCCATGATCGC
GTCTTCTGCCCTCGTATTGGGCTATACGCGAGGCTTCGATGCCATCCCCATAGAAATGATCTCTCAGCGCACTCTCTACG
GAGTCAACAGTTTTACCTTGTTGGCTATTCCTGCTTTTCTCTTCATTGGCCGCTTGATGAACTCGGCAGGCATATCGGAC
CGCGTTTTCGACGTGGCACGTACCATGGTTGGCCATTTCAAAGGGGGATTGGGCCACGTCAATGTGGTAGCCAGCATGCT
GTTTGCAGGTATGTCGGGGTCGGCAGTCGCTGATGCCGGTGGCCTTGGAGCGTTGGAAATAAAAGCCATGGAAGATGATG
GATATCCAACGGGGTTCAGTGCTGCTGTCACCGCCAGTTCAGCCACTATCGGTCCGATCATTCCACCCAGTATTCCCGCC
GTTATTTACGGGGCTTTGGCGAATGCTTCAATCGCTTCCATCTTCCTCGCGTCGATCATTCCCGGTTTGTTCATGGGGCT
GGGACTGATGCTCATGGTGGCTATCATTTCACATCGCCGTGGATTCCCTACACGAACTCGGGCACGCCTCAACGATGTCT
TGCGGGCGCTTTCGCGTGGGCTGTTACCTATGTTGACCCCGTTGATCATCATCGTGGGGATTCTCTCAGGCGTGTTTACG
CCTACAGAAGCCTCGGTGATTGCCCTGTTGTATTGCATGATCATCTCGTTCCTGGTTTATCGCTCGATCACCTTTAGGGA
GTTTCTGGGGATTCTCCGAGCCACTGCCATCGATACTGCCGCACTGCTTTTCATCATTGCTGGAAGCGCTCTTTATAGCT
GGGTGCTGGCGCGTTACCAAGTCACGGCGTTAGTAGCGGATTTTTTGTTGGCTACTGTGACCGATCCGCTCGGCCTGATG
TTGTTGTTGGTCGTGTTCATCCTGCTGATCGGGTTGTTTATCGATTCGGTACCGGCTTTGTTTCTCTTGACCCCCCTGTT
GGTGCCGGTAGTGACTCAATATGGCATCGACCCCGTTCACTTTGGTGTGGTCATGATCTTTACCTTGATGATCGGTTTGA
TCACGCCACCGGTGGGTACGGTCCTATTCACCATACAAAAAATAACCGGGATGTCATTCGTAGGGTTGGTACGGGAGACC
ATACCTTTCTATATCCCTTTGTTCGTGGTGCTTCTGATCATTACGTGTTTTCCATCTATCGTCATGTTTTTGCCCAGTTT
GATTCTTGGTTGA

Protein sequence : 
MEVFTIMFIGLIVLLMLGVPVAFAMIASSALVLGYTRGFDAIPIEMISQRTLYGVNSFTLLAIPAFLFIGRLMNSAGISD
RVFDVARTMVGHFKGGLGHVNVVASMLFAGMSGSAVADAGGLGALEIKAMEDDGYPTGFSAAVTASSATIGPIIPPSIPA
VIYGALANASIASIFLASIIPGLFMGLGLMLMVAIISHRRGFPTRTRARLNDVLRALSRGLLPMLTPLIIIVGILSGVFT
PTEASVIALLYCMIISFLVYRSITFREFLGILRATAIDTAALLFIIAGSALYSWVLARYQVTALVADFLLATVTDPLGLM
LLLVVFILLIGLFIDSVPALFLLTPLLVPVVTQYGIDPVHFGVVMIFTLMIGLITPPVGTVLFTIQKITGMSFVGLVRET
IPFYIPLFVVLLIITCFPSIVMFLPSLILG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-69 45
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-69 45
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-69 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_3212 YP_575255.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 8e-70 45