Gene Information

Name : Csal_3144 (Csal_3144)
Accession : YP_575187.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Resistance
Product : NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 3500468 - 3501463 bp
Length : 996 bp
Strand : -
Note : -

DNA sequence :
GTGACGCATATCGCCATGTTCAGTGCCCAGCCGTATGACCGGCGTTTCTTCGAGGCGGCGAATGCGCGCCATGGCTTCAA
GATCGGCTATCACGAGGTGGCGCTCAACGCGGAGAGTGCCGTGCTGGCCCATGGTGCAGACGGCGTGTGCGCCTTCGTCA
ACGATACCCTGGACGCCACCGTGCTGACGGCGCTCGCGACCCAGGGCGTAGGGTTCGTGGCCATGCGTTGCGCCGGGTTC
AACAATGTCGACATCGAGGCCGCTGCACGCTTGGGCATCGCCGTGGTGCGCGTGCCGGCCTACTCGCCCGAGGCGGTGGC
CGAGCATGCCCTGGCCTTGCTGCTGACGCTGAACCGCCGCACGCATCGGGCCTACAATCGCGTACGCGAGGGCAACTTCA
TGCTCGAGGGCTTGTTGGGCATGACGCTGCACGGCAAGACGGTGGGGGTGATCGGGACCGGTCGCATCGGGTTGGCCACG
GCACGCATCTTCGCCGGTCTCGGCTGTCGCTTGCTGGGCGAGGACCGCTACCCCAGCGAGGCGTTCACGACGCTGGGTGG
CGAGTATGTCTCGCGCCGGCGCCTGCTGGCGGAGAGTGATGTGATCAGCTTGCATTGCCCGTTGACGGACGATACGCGTT
ATCTGATCGATGCCGAGGCCCTGGCGGCGATGAAGCCGGGGGCCCTGTTGCTCAACACCTCGCGCGGTGCTCTGATCGAT
ACGCGCGCGGTGGTCGACGCGCTCAAGGCGCGCCGTCTGGGCGGGCTGGCCATCGATGTCTACGAGCAGGAAACCTCGTT
GTTCTTCCGCGACCATTCCGACGACATCATCGACGACGATGTCTTTCAGCGTCTGGTGACCTTCCCCAACGTGCTGATCA
CCGGGCATCAGGGATTTTTCACCCAGGAGGCGCTGGCCGAGATCGCCGAGGTCACGCTCGACAATGTGGCCTGCGTGCAG
CGTGGCGCGCCTTGTGCCAATCGTGTCGACGATTGA

Protein sequence :
MTHIAMFSAQPYDRRFFEAANARHGFKIGYHEVALNAESAVLAHGADGVCAFVNDTLDATVLTALATQGVGFVAMRCAGF
NNVDIEAAARLGIAVVRVPAYSPEAVAEHALALLLTLNRRTHRAYNRVREGNFMLEGLLGMTLHGKTVGVIGTGRIGLAT
ARIFAGLGCRLLGEDRYPSEAFTTLGGEYVSRRRLLAESDVISLHCPLTDDTRYLIDAEALAAMKPGALLLNTSRGALID
TRAVVDALKARRLGGLAIDVYEQETSLFFRDHSDDIIDDDVFQRLVTFPNVLITGHQGFFTQEALAEIAEVTLDNVACVQ
RGAPCANRVDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 9e-31 41
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_3144 YP_575187.1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase AF310956.2.orf4.gene Protein 4e-31 41
Csal_3144 YP_575187.1 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase U35369.1.gene5.p01 Protein 2e-31 41