Gene Information

Name : Csal_3012 (Csal_3012)
Accession : YP_575055.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3354217 - 3355104 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
GTGAACGATCTCGAATGGCGCGATGCCTTTCTCGATGGGTTATGGCTGGAGCGAGGGTTGAGCCAGCATACGCTGGCGGC
CTACCGGCGTGACCTGGATGCCTGGCTCGCGCATCTCGCGGCGCGTGGCGCCTGCCTGATGGCGCCCGACGAACAGGCGC
TGGAGACGTTCCTGGCGGCGCGTCGCGAGCACTACCACCCTCGCTCGGTGGCCCGTCTGCTGTCCTGCTTGCGGCGTTTC
TACCGTTGGGCGCTGGCCGAGGGGCACGTCAGCGTCGACCCGCTGGCCGACGCACGTGCCCCCAGGGCCGTCACCAAATT
GCCCGATACCCTGGACGAGGCCGAGGTGGAACGGCTGCTCGCGGCGCCCGATGTCGAGCTGCCGCTGGGTCTGCGGGACC
GCACCATGCTCGAGGTGCTCTATGGGTGCGGCTTGCGCGTTTCCGAGCTGGTGGGCCTGACGGTGGACGCGGTCAATCTG
CGCCAGGGAGTGCTGCGCGTGCTCGGCAAGGGCGACAAGGAGCGCCTGGTGCCGCTGGGCGAGGAGGCGACCGCATGGCT
GGCGCGCTACTTGCGCCAGGGACGCGGCGACTTGATGCAGGATCCTACCCGGCCGCCCTTGTTTCCCGGCCGACACGATG
GCTTCATGACGCGTCAGACGTTCTGGCACCGCATCAAGCGACATGCCGTGTCGGCGGGCATCGACAAGCCGCTGTCGCCG
CATACGTTGCGTCATGCGTTCGCGACGCACCTGTTGAATCATGGCGCCAACTTGCGTGTCGTACAGATGTTGCTGGGTCA
TAGCGACCTGTCGACCACGCAAATCTATACCCAAGTGGCCCAGGCGCGGCTGGAAGCGCTGCACGCCCAACATCATCCCA
GAGGTTGA

Protein sequence :
MNDLEWRDAFLDGLWLERGLSQHTLAAYRRDLDAWLAHLAARGACLMAPDEQALETFLAARREHYHPRSVARLLSCLRRF
YRWALAEGHVSVDPLADARAPRAVTKLPDTLDEAEVERLLAAPDVELPLGLRDRTMLEVLYGCGLRVSELVGLTVDAVNL
RQGVLRVLGKGDKERLVPLGEEATAWLARYLRQGRGDLMQDPTRPPLFPGRHDGFMTRQTFWHRIKRHAVSAGIDKPLSP
HTLRHAFATHLLNHGANLRVVQMLLGHSDLSTTQIYTQVAQARLEALHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-62 59
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-62 59