Gene Information

Name : Csal_2978 (Csal_2978)
Accession : YP_575022.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 3315950 - 3317230 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGTCTTCATTCTCTTCAGCGTATTCATCGTGCTGCTGCTGATCGGCATCCCCATCGCCTTTTCCCTGGGCATCGC
CTCGCTCTCCTATCTCCTGCTCGCGGACATCTCGCTGACCATCATCCCGCAGCGAATGTACGGCGGCATCGACACGTTCG
TGCTGCTGTGCATCCCCGGCTTCGTGCTGGCCGGCAACCTGATGAACGTCGGCAACATCACCGACCATATCGTGCGTTTC
TCGAACGCGCTGGTGGGGCACATCCGTGGCGGCCTGGGGCTGGCCAACGTGGGGGGCTCGATGATCTTCGGCGGGATCTC
CGGCACCGCCGTGGCCGACGCGGCGAGCATCGGCTCGGTGATGATCCCCGGCATGTCCCGCGCCGGGTACGACAAGCCCT
TCGCCGCCGCGGTGACCGCCGCCTCCTCGACGGTGGGCCCGATCATCCCGCCCAGCGTGCCGATGATCATCGCCGGCTCG
CTGTCCGGCGTCTCGGTGGGACGCATGTTCCTGGCCGGCGCCATCCCCGGCCTGCTGCTGGGCCTGGCGATGATGATCAC
CGTGTACATCCTGGCGGTGAAACGCGGGTACCCGCGCGAGAAACGCTCCACGTTCCGGCAACTGGTGCTGGAAGGACGCA
GTGCCTTCTGGGCATTGCTGATGACCTTCATCATTCTCTACGGGATCGTCGGCGGCGTTTTCACCCCCACCGAAGCCTCG
ATCGTCGCCAGCCTGTATGCCCTGGTGATCGGCATGTTCGTCTACAAGGGCATCACCTGGCGCAATCTGCCGCAGATCGT
CATCGACACCGTCCTGACCTCGGGGTCGCTGATGATCCTGGTCGGCCTGGCCAATCTGTTCGGCTGGATCCTCACCAGCC
AGCAGATTCCGCAGATGATCGCCGACCAGATCCTGGCCATCAGCGACAACCCGCTGGTCGTGATCCTGATCCTCAATCTG
ATCCTGCTGGTGGTGGGTACCTTCATGGAAACCATCGCTGCCCTGATCATCCTGTTCCCGGCGCTGCTGGGCGTCGCCAC
CGGGGTCGGCATGGATCCCGTGCACTTCGGCCTGATGGCGGTGCTCAACCTGATGATCGGACTGACCACACCGCCGCTCG
GGGTCTGCCTGTTCGTGGTCGCCGGCATCGGCAAGCTGCCCATGCTGCGCGTGGCCCGTGCCATCGTGCCGTTTCTGATC
TGCAATCTCGTGGTGCTGCTGCTGGTCGCATACATCCCCGCCCTGTCACTCTGGCTACCCAACCTGCTGCTCGGGGAGTG
A

Protein sequence : 
MEVFILFSVFIVLLLIGIPIAFSLGIASLSYLLLADISLTIIPQRMYGGIDTFVLLCIPGFVLAGNLMNVGNITDHIVRF
SNALVGHIRGGLGLANVGGSMIFGGISGTAVADAASIGSVMIPGMSRAGYDKPFAAAVTAASSTVGPIIPPSVPMIIAGS
LSGVSVGRMFLAGAIPGLLLGLAMMITVYILAVKRGYPREKRSTFRQLVLEGRSAFWALLMTFIILYGIVGGVFTPTEAS
IVASLYALVIGMFVYKGITWRNLPQIVIDTVLTSGSLMILVGLANLFGWILTSQQIPQMIADQILAISDNPLVVILILNL
ILLVVGTFMETIAALIILFPALLGVATGVGMDPVHFGLMAVLNLMIGLTTPPLGVCLFVVAGIGKLPMLRVARAIVPFLI
CNLVVLLLVAYIPALSLWLPNLLLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-64 47
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-64 47
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-64 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2978 YP_575022.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 1e-64 47