Gene Information

Name : Csal_2702 (Csal_2702)
Accession : YP_574748.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3029431 - 3030303 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence : 
ATGACACACGACATATCCGCCGGCGAGCGCGACGCTACCCGGCCCGACACGCCCTCGGCCACACCAGCACCGGAGATGAC
GGTACGGGATCTGTCGCTGTCCTACGGCCCGGTCGCGGTGATCGAGAACCTCGACCTGCGATTGCCGCCGGGCCGGGTCA
CGGCGATCGTCGGCCCCAATGGCTGCGGCAAGTCGACGCTGCTGGCCGGCCTTTCGCGGCTGCTCAAGCCCCGGGACGGC
ACGGTGCTGCTCGATGGCGCGGACATTCAGCGCCTGCCGAGCCGCCAACTGGCCAAGCGCCTGGCGCTGTTGCCGCAACA
GCCCCATGCCCCCGAGGCGCTGACCGTGGCCGAGCTGGTACGCTTCGGTCGGCACCCGCATCAGAGCTGGCTACGCCAAT
GGTCTCCGGAGGACAAGCGGATCGTCGACGCGGCGCTGGACATGACGGGCCTGACGCCGCTTGCCCAGCGCCCCGTGGAT
GCCCTCTCCGGCGGCCAGCGCCAACGCGCGTGGATCGCCATGGCCATCGCCCAGCAGACCGCAACGCTGCTGCTCGACGA
GCCCACCTCGGCGCTCGACCTCGGCCATCAGGTCGAGGTCTACGAACTCATTCAGTCGCTGGCGACATCGGGCAAGACCA
TCGTCATGGTCATCCACGACCTGGCGAGTGCATGCCGCTACGCCGATCACCTGATTGCCATGCATCAGGGCCGCGTCGTC
GCCGAGGGGCCACCCGGCGAGACGGTCACGCCGGCGCTGGTCAAGCGGCTGTACGGCGTCGAGTGCTCGCTGATGACGGA
CCCTGCCACGGGTGCGCCACTGCTCACCAACGTTCGCCGCACGCGAGACGTTCTCGACGGCAGCGCGACCTAG

Protein sequence : 
MTHDISAGERDATRPDTPSATPAPEMTVRDLSLSYGPVAVIENLDLRLPPGRVTAIVGPNGCGKSTLLAGLSRLLKPRDG
TVLLDGADIQRLPSRQLAKRLALLPQQPHAPEALTVAELVRFGRHPHQSWLRQWSPEDKRIVDAALDMTGLTPLAQRPVD
ALSGGQRQRAWIAMAIAQQTATLLLDEPTSALDLGHQVEVYELIQSLATSGKTIVMVIHDLASACRYADHLIAMHQGRVV
AEGPPGETVTPALVKRLYGVECSLMTDPATGAPLLTNVRRTRDVLDGSAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-58 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-56 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-56 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-56 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-56 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-59 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-51 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-55 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-55 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-55 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-55 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-51 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-51 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2702 YP_574748.1 ABC transporter-like protein BAC0164 Protein 5e-58 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2702 YP_574748.1 ABC transporter-like protein VFG0925 Protein 1e-62 52
Csal_2702 YP_574748.1 ABC transporter-like protein VFG1042 Protein 5e-58 50