Gene Information

Name : Csal_2273 (Csal_2273)
Accession : YP_574322.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : ATPase AAA-2
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2555012 - 2557681 bp
Length : 2670 bp
Strand : +
Note : -

DNA sequence :
GTGAGTCTCAAATCCCTCTTCGACAAACTCAACGATCCCTGCCGCGAGGCCACTGAAGGCGCCGCCGCGCTATGCCTGGC
GGAGCGCCAGTACGACGTGGACATCGAACACCTGTTGCTCAAGCTGCTCGACAGCGACGACAACGATTTCCTGCGCATCG
CACGGCACTACGACGTGTCGCTCGATCGCCTGGCGACCCAGCTCGAGGACACGGTGTCCACCTTCAAGACCGGCAATACC
CGAACGCCTGCCCTGTCGCCACGCATCACTCGGCTGATCGAGCGTGCCTGGGTCATCGCCTCGATCGATCATGGCGAAGC
CCAGATTCGCAGCGGCCACCTGCTGCTGGCATTGCTGAAGGACGATGAACTGCGCCGCGTACTGCTCGATGGGGCCCGTG
AGCTGGAACGCATCAATGTCGACGACCTGCAGGCACACCTCGATGACCTGATCGGGGGCAGCAGCGAAGATCAGTACGTA
CGCCCGCTCGGCGAAGGAGCGAACGAGGATGGCCAGAGCGCTCGCCAGGCATCGGACGCCAGGAGCGAAGGCAGTCGCTC
CGGCAAGAGCAAGACCCCGGCGCTGGATCAATACACCATCGACCTGACCGGCAACGCCCGCGCCGGTCGCATCGACCCGG
TGCTCGGCCGCGAGGAAGAAGTGCGCCAGATGGTGGACATCCTCACCCGGCGTCGCCAGAACAACCCGATCCTCACCGGG
GAGGCCGGCGTCGGCAAGACCGCCGTGGTCGAAGGCCTGGCACTGCGCATCGTCGACGGCGATGTACCGCCACCGCTCAA
GAACGTCGAGCTGCGCACGCTCGATCTGGGGCTTCTGCAAGCCGGCGCCGGGGTCAAGGGCGAGTTCGAGAACCGGCTCA
AGAACGTGATCGAGGAAACCAGGCGCAGCCTGCACCCGATCATCCTGTTCATCGACGAGGCCCACACCCTGATCGGCAGC
GGCGGACAGGCCGGTCAGGGCGATGCCGCCAACCTGCTCAAGCCGGCGCTGGCACGCGGGGAGCTGCGCACCATCGCCGC
CACCACCTGGGCGGAATTCAAGAAGTACTTCGAGAAGGACGCCGCGCTGGCCCGTCGCTTTCAGGTCGTCAAGGTCGAGG
AACCGGCCGAACCGGTGGCCATCAACATGCTGCGCGGTCTGAACGAGCGCATGCAGGACCACCACAAGGTGACCATTCTC
GATGACGCCATCGTCCAGGCCGTACGCCTGTCGCACCGCTACATCACTGGCCGCCAGTTGCCGGACAAGGCCGTCAGCGT
GCTCGATACCGCCTGCGCGCGGGTCGCCCTGGCACAATCGTCGCAGCCGGCGGCGCTCGAAGATGCCTACCGCCGCGTCG
ACAACCTCAACAGCGAGATTGCCGTTCTCCAGCGCGAACAGCGTGAAGGCAGCGATCACGCCGAAACGCTGGCCGCGCTC
GACGAACAGCTTACCGCGACCCAGGGCGAGATAGACGACCTGCGCGCACGCTGGGAGCGCGAGCAGGAGATCGTGACGCG
CCTCAAAGCGCTGGAAGCGGAACGCGAAGCCATCGAGGCCGGCCAGCAAAGCGGCGATGTCGACGCGTTGAGCCGGCAGA
TCGGCGAGGTCCGGCGCGAACTGGCCGAGGTCCAGGGCGAGCACTCGCTGGTCCACGGCCATGTCGACGGCAACGTGATC
GCCGAGGTGATTTCCAACTGGACCGGCATTCCACTCGGCAAGATGATGCGCGACGAGATCGCCACCGTGCAGCGCCTCCC
CGAACTGCTCGGCGAGCGCGTGCTGGGCCAGGACCATGCGCTGGCCGAGATCGGCAAGCGCATCGCGATCTCGCGGGCCC
GGATGGAGGACCCCAACAAGCCGATCGGAGTCTTCCTGCTGCTCGGCCCCAGCGGCGTCGGCAAGACCGAAACCGCGCTG
TCGCTGGCCGATACTCTCTACGGTGGTGAACGTAACGTCATCACCATCAACATGTCCGAATATCAGGAGGCGCATACCGT
CTCCAGCCTCAAGGGCTCACCTCCCGGGTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCGGTGCGCCGCAAGC
CCTACAGCGTGGTACTGCTGGATGAAGTCGAGAAAGCGCACCCGGACGTGCTGGAGCTGTTCTTCCAGGTGTTCGACAAG
GGCGTGCTGGACGACGGCGAAGGCCGCGAGATCAACTTCCGCAACACCGTGATCCTGCTCACGTCCAACGTCGGTACCGA
CGACATCATGCAGCAGTGTCTGGGCGCCGAGTCCCTGCCCGCCCCGGGTGCGATCGTCGACAGCCTGCGCGATCAGCTCA
ACGCCGTGTTCAAGCCGGCGTTTTTGGGCCGTTTGAACATCATTCCCTACTACCCGGTGCAGAAAGAGATTCTGCACAAC
ATCGTTCGGCTCAAGCTCGACCGCATCAAGCATCGCTTCGAATACAACCACCGCGCCGACTTCGACTACGATCCGGCGAT
CATCGAAGCCATCGCCGAGCGCTGCACCGACAGCGACAGCGGTGCGCGCAATATCGACAACATTCTCTCCGGCAGCCTGA
TGCCGACCATCGCCACGCAGGTACTGGACCGCATGGCCAGCGGTGAATCCATCGAACAGCTCACGGTCAGCCTCGACGCT
CAGGGGGAGTTCGCATATGCCCTGCGCTGA

Protein sequence :
MSLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVSLDRLATQLEDTVSTFKTGNT
RTPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLKDDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYV
RPLGEGANEDGQSARQASDARSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTG
EAGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEETRRSLHPIILFIDEAHTLIGS
GGQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKDAALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTIL
DDAIVQAVRLSHRYITGRQLPDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAAL
DEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRELAEVQGEHSLVHGHVDGNVI
AEVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHALAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETAL
SLADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK
GVLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPAFLGRLNIIPYYPVQKEILHN
IVRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDSGARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDA
QGEFAYALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-163 48
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-137 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-137 43
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-93 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2273 YP_574322.1 ATPase AAA-2 VFG2076 Protein 0.0 51
Csal_2273 YP_574322.1 ATPase AAA-2 VFG2084 Protein 1e-147 44
Csal_2273 YP_574322.1 ATPase AAA-2 VFG0079 Protein 2e-102 41