Gene Information

Name : Csal_2085 (Csal_2085)
Accession : YP_574135.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : two component, sigma54 specific, Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2352772 - 2354133 bp
Length : 1362 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGCATCCACCGAATTGCCTACCGCCTCCGTGCTGATCGTCGATGACGAGCCCGGCATGCGTAGCTATCTGAGCAA
GGCGTTGGCGTCGCGATTCGCGCTGATCGAAACCGCCGATTCGCTCACCGCGGCGGAGGCCCTGCGTCAACGGCTGCACT
TCGATCTGCTGCTGGTCGACATCCGGCTCCCCGACCGCTCCGGCATCGAGTGGCACGAGGCACTCGGCCCCGAGCGGCGC
AGCGACATCATTTTCATGACGGCCTACGCCGATCTCGACATTGCGGTGAAGGCATTACGCGCCGGCGCCAGCGACTTCAT
CATCAAGCCGTTCCGGCTGGAACAGCTGCAAAGCGCCGTCGATCGCTGCCTGGCCCAGCGCCGACTGGCACGCGAGAACT
TCGTTCTCAAGCGCGAGGCGCAACGTCTGCACAGTCCCGACGAGAGCATGATCGGCGACAGTCAGGCCATGGCACGGGTC
AGGACGATCATCGAGCGCGTGGCGCCTACTCCCTCGGCGGTCTTGATCTATGGCGAGTCGGGCACCGGCAAGGAGCTCGT
GGCCCGCGACCTGCATCGCCTGTCGGGACGTTTCGGCGCCTTCGTACCGCTAAACTGCGGCGCCATCGCCGGCGACTTGC
TGGAATCGGAGCTGTTCGGACACACCAGGGGCGCGTTCACCGGCGCGGTGAAGACCCGTGAAGGGCTTTTCACCTATGCC
GACGGTGGCACTCTCTTCCTCGACGAAATCGCCGAAATGCCGCTGGCCATGCAGGCCAAGCTGTTGCGGGTGCTCGAAAG
CAAGCGCATCCGTCCGGTGGGCAGCGAGCAGGAACAGCCGGTGGATGTGCGCATCGTCGCGGCCACGCATCGCAATCTGC
AGCATGAGGTCAACGAGGGTCGCTTCCGCGAGGACCTGTATTTTCGCCTCAACGTGCTGACACTACCGTTGCCGGCGTTG
CGCGAACGTCCCGAAGACATACCCGCTCTGGCACATCATTTCTCGCGACAGTTGTCCCGCGACCTGGGACTCGACGCCCT
GCCGTGGCAGCATGCCGACCTCGAGCGCCTGACGCATTATTCCTGGCCGGGCAACATCCGCGAGCTCAAGAACTTCATCG
AACGCTGCATCCTGCTCGGCCAATTGCCGAGCGACATGTTCGATGATGCCGTCGTTGCCGAAACCAACCTCAACGCCGAC
GGCTACCCCACGGACTGGACTCTGGACGCCGTCGAACGAGCGCATATCCTCAACGTGCTGGACGCGCACGCCAACAACAA
GTCCAGTGCCGCTCGCGCGCTCGGCGTGTCGCGCAAGACGCTCGATCGCAAGCTCACCGCCTGGCAAGACCTCGACGCAT
GA

Protein sequence : 
MTASTELPTASVLIVDDEPGMRSYLSKALASRFALIETADSLTAAEALRQRLHFDLLLVDIRLPDRSGIEWHEALGPERR
SDIIFMTAYADLDIAVKALRAGASDFIIKPFRLEQLQSAVDRCLAQRRLARENFVLKREAQRLHSPDESMIGDSQAMARV
RTIIERVAPTPSAVLIYGESGTGKELVARDLHRLSGRFGAFVPLNCGAIAGDLLESELFGHTRGAFTGAVKTREGLFTYA
DGGTLFLDEIAEMPLAMQAKLLRVLESKRIRPVGSEQEQPVDVRIVAATHRNLQHEVNEGRFREDLYFRLNVLTLPLPAL
RERPEDIPALAHHFSRQLSRDLGLDALPWQHADLERLTHYSWPGNIRELKNFIERCILLGQLPSDMFDDAVVAETNLNAD
GYPTDWTLDAVERAHILNVLDAHANNKSSAARALGVSRKTLDRKLTAWQDLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-64 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2085 YP_574135.1 two component, sigma54 specific, Fis family transcriptional regulator BAC0467 Protein 2e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_2085 YP_574135.1 two component, sigma54 specific, Fis family transcriptional regulator VFG1214 Protein 2e-71 42