Name : fliP (Csal_1965) Accession : YP_574016.1 Strain : Chromohalobacter salexigens DSM 3043 Genome accession: NC_007963 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2221136 - 2221885 bp Length : 750 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAACGTCGCTGTCATGCTGCGTTGCGGACTCGCCGTATTGCTGCTGGCCTGGCCGGCCTTCGGTTGGGGGCAGGAAAT TTCCGGCATCGTCAGCGAGCCCACCGGCGATGGCGGCCAGCAATGGTCGCTGAGCCTGCAGACGCTGCTGTTTCTCAGCT CGCTGGCCTTCCTGCCGGCGCTGCTGCTGGGCATGACCTGCTTTACGCGCATCATCATCGTGCTCAGCCTGTTGCGCACC GCGATCGGTACCCAATCGACGCCGCCCAATCAGGTGCTCCTCGGCCTGGCGCTCTTCATGACCTTCTTCATCATGTCGCC GGTGCTGGATCGCGTGCACGAGCAGGCCTGGGTGCCCTTCTCCGAGGAGCGGATCAGCCTCGAGCAAGCCCTGGAACAGG GCAGTCAGCCGTTCCGGGAGTTCATGTTCGGCCAGACCCGTGAAACCGATCTGGCGCTCTTCGCGCGCATGGCCGACGCC GATGAAATGCAGGGCCCCGAAGACGTCCCGATGCGTCTGCTGATACCGGCCTTTTTGACCAGCGAGCTGAAGACGGCATT CCAGATCGGGTTCAGCATCTTCATCCCCTTCTTGATCATCGATCTCGTGGTGGCCAGTGTCCTGATGGCACTGGGGATGA TGATGGTGCCGCCCGCGACCATCTCGCTGCCCTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGCTGGCAGTTATTGATC GGCTCCCTGGCCGAAAGCTTCTACATGTAA Protein sequence : MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPALLLGMTCFTRIIIVLSLLRT AIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPFSEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADA DEMQGPEDVPMRLLIPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI GSLAESFYM |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 43 |
hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 43 |
hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 43 |
hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-26 | 43 |
hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 3e-21 | 43 |
hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 2e-21 | 43 |
hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 2e-21 | 42 |
hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 9e-21 | 42 |
hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 9e-21 | 42 |
hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-21 | 42 |
XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-30 | 42 |
hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-30 | 42 |
hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 3e-29 | 42 |
escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-29 | 42 |
escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-29 | 42 |
hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 2e-29 | 41 |
hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-30 | 41 |
hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-30 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-65 | 75 |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-70 | 72 |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-56 | 59 |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-54 | 58 |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 7e-32 | 41 |
fliP | YP_574016.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 2e-30 | 41 |