Gene Information

Name : Csal_1487 (Csal_1487)
Accession : YP_573539.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 1686011 - 1687303 bp
Length : 1293 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCTTGCCCTGCCCATCTTCATCGCCACGCTCATTCTCGTCATCTGGCAGCCGCGTGGCCTGGGGATCGGCTGGAG
CGCAAGCGCGGGCGCGTTGATCGCGCTGCTCACCGGGGTCATCCACCCTGCGGACATTCCCGCCGTGTGGTCGATCGTCT
GGAACGCCACCTTCACCTTCATTGCCATCATCATCACCAGCCTGCTGCTCGACGAGGCCGGCTTCTTCGAATGGGCGGCC
TTGCATATCGGCCGTTGGGGCAACGGCCGGGGGCGTCGCCTGTTCGTCCTGGTGGTACTGCTCGGTGCCGTGGTCGCGGC
GGTGTTCGCCAACGATGGCGCGGCCTTGATCCTCACCCCGATCGTCTTCGAGATGCTCGTCGCCCTGGGCTTCAGCGCCG
GTGCGACACTGGCGTTCGTGATGGCCGCCGGCTTCATCGCCGATACCGCCAGCCTGCCGCTGGTGATTTCCAACCTGGTC
AATATCGTCTCGGCGGACTATTTCGATATCGCCTTCGGCGAATACGCGGGCGTCATGGTGCTCGTGGACATCGTCTCGGT
ACTTGCCTCGCTCGGCATGCTGTACCTGTTCTTTCGACGTGCGGTGCCCTCGACCTATGCCCTCGGCGACCTGCGCAAGC
CACGCGAGGCCATTCGCGATCCGGCGGTCTTCAAGGCCGGCTGGTGGGTACTGGGGCTCTTGCTGGTGGGCTTCTTCGTG
GCCGAACCGCTGGGCGTACCGGTCTGCGTGATCGCCGCCATCGGTGCGTCGATCCTGTTCGTGATCGCCCAGCGCGGTCA
TCACATCCACACCCGCAAGGTGCTGCGCGACGCCCCCTGGAACATCGTGGTGTTTTCGCTGGGCATGTACCTGGTGGTGT
ATGGCCTGCGCAACGCCGGACTGACCGACATGATCGCCGGCGGCCTGGAATGGCTGGGCGGGCATGGCCCCTGGATCGCC
ACGCTGGGGACAGGCTTCATCGCCGCCGGGCTTTCCTCGGTGATGAACAACATGCCCACCGTACTGGTGGTCGCCTTGTC
GATCGATGCCAGCGACGTCACCGACCTGACCCAGCAGGCGATGGTCTATGCCAACGTCATCGGCAGCGACCTGGGCCCCA
AGATCACGCCCATCGGCAGCCTCGCCACCCTGCTGTGGCTGCACGTCCTGGCGCGCAAGGGCATGACCATCGGTTGGGGC
TATTATTTCCGCGTGGGCATCGTGCTCACCGTCCCCGTGCTGACGGTCACCCTGCTGGCACTGGCTGCCTGGCTACAGTT
TCTCGCGGCATGA

Protein sequence :
MLLALPIFIATLILVIWQPRGLGIGWSASAGALIALLTGVIHPADIPAVWSIVWNATFTFIAIIITSLLLDEAGFFEWAA
LHIGRWGNGRGRRLFVLVVLLGAVVAAVFANDGAALILTPIVFEMLVALGFSAGATLAFVMAAGFIADTASLPLVISNLV
NIVSADYFDIAFGEYAGVMVLVDIVSVLASLGMLYLFFRRAVPSTYALGDLRKPREAIRDPAVFKAGWWVLGLLLVGFFV
AEPLGVPVCVIAAIGASILFVIAQRGHHIHTRKVLRDAPWNIVVFSLGMYLVVYGLRNAGLTDMIAGGLEWLGGHGPWIA
TLGTGFIAAGLSSVMNNMPTVLVVALSIDASDVTDLTQQAMVYANVIGSDLGPKITPIGSLATLLWLHVLARKGMTIGWG
YYFRVGIVLTVPVLTVTLLALAAWLQFLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-114 71
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-85 56
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-85 56
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-88 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0578 Protein 1e-114 72
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0577 Protein 3e-112 72
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0576 Protein 4e-115 72
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0031 Protein 1e-116 71
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0574 Protein 8e-85 56
Csal_1487 YP_573539.1 arsenical pump membrane protein BAC0575 Protein 5e-88 56