Gene Information

Name : Csal_1400 (Csal_1400)
Accession : YP_573454.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Unknown
Product : Phage portal protein, PBSX
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 1588487 - 1589557 bp
Length : 1071 bp
Strand : +
Note : -

DNA sequence :
ATGACCACGGCCGACAAACCCCGCATGCGTGTGCCGGCGACCCTGTCCGAGTCCGAACCGGCGGCGGAGGCGTCGCCAGC
CCCGGCGCGGGCCGAGGCGTTCACCTTCGGCGAGCCGGTACCGGTGACGGACCTGGCCGATTTCCTCTACACCGGCTGTT
GGATGCTGACGGCGCGCTGGTACGAACCGCCGGTGGATCTGCCAGCGCTGGCCAAGGTGTATCGCGCGACGGCACATCAC
GGTTCCAGTTTGCAGGTGAAGCGCAACATTCTATCGCGATCGTTCATTCCGCATCGCCTACTGAGCCGGCAGGCGTTCCG
TGCCCTGGTCACGGATTACCTGGTGTTTGGCAATGCGTACATCGAGCGGGTGTATGGGCGCCTTGGGCGGCTGCTGGCAT
TGCGGCCGGCGCGAGCCAAGTACGTGCGCCGAGGCGTCGAAGAAGGGCAGTACTGGTGGGTGACATCCTGGCAGGTGGCC
AGCGAATTCGAGCGCGATTCGGTGATCCACCTGATGGAGCCTGACATCAACCAAGAGATCTACGGCGTGCCGGACTACCT
CGGCGCGCTGCAGTCGATCCTACTCAACGAAAACGCTACCTTGTTCCGCCGCAAGTACTACCTGAACGGTAGTCATGCCG
GCTTTGTGATGTACGTCTCCGATACCGCGCAGAACCAGGAAGACATCGATGCCATGCGCGAGGCCCTGCGCAACTCCAAG
GGCGTGGGCAACTTCCGCAACCTGTTCCTTCACTCGCCGGGCGGCAAGAAGGATGGCGTACAGATCATCCCCATCAGCGA
GGTCGCCGCCAAGGACGAATTCGCCGGCATCAAGCAGGAAACCCGCGACGACACCCTCGCCAGCCACCGCGTACCGCCCC
AGCTGATGGGCGTGATGCCCAACAATGTCGGAGGATTCGGCGACGTGGAGAAGGCGGCCAGGGTCTTCGTCACCAACGAG
CTCGAGCCGCTGCAAGCCGTCTTCGAAGAGGTCAACGACCTGGTGGGGGAGCAGGTGATCCGGTTTCGGCCTTACACACT
TGAGGCGGCCAGCGAATCGCCAACCGGATAA

Protein sequence :
MTTADKPRMRVPATLSESEPAAEASPAPARAEAFTFGEPVPVTDLADFLYTGCWMLTARWYEPPVDLPALAKVYRATAHH
GSSLQVKRNILSRSFIPHRLLSRQAFRALVTDYLVFGNAYIERVYGRLGRLLALRPARAKYVRRGVEEGQYWWVTSWQVA
SEFERDSVIHLMEPDINQEIYGVPDYLGALQSILLNENATLFRRKYYLNGSHAGFVMYVSDTAQNQEDIDAMREALRNSK
GVGNFRNLFLHSPGGKKDGVQIIPISEVAAKDEFAGIKQETRDDTLASHRVPPQLMGVMPNNVGGFGDVEKAARVFVTNE
LEPLQAVFEEVNDLVGEQVIRFRPYTLEAASESPTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 2e-92 61
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 2e-92 61
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-79 56