Gene Information

Name : Csal_1187 (Csal_1187)
Accession : YP_573242.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 1361382 - 1362911 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGACTCACTCCACCCCTTCAAACCCTGTCACTCACGCCGATTGGCAGGCCCTGGCCGAGCACCTGACTGTCGAAGCAGG
CCTCGAGGCGCGTGCCTATATCGATGACACCTTCGTCGATGCCGCCGATGGCGCGACCTTCACCACGCTCAATCCGGCCA
CCGGCGAGACGCTCGCCGAAGTGGCCAGTTGCGATGCGGCCGACGCCGAGACGGCGGTGTCGGTGGCGCGGCGTGCCTTC
GAGAGCGGCGCGTGGTCGCGTTCGTCACCGGGCGAACGCAAGGCCGTGCTGCTGCGTCTGGCCGACCTGATGGAGGCGCA
CAAGCACGAGCTGGCGCTGCTCGACAGCCTGGACATGGGGAAGCCGGTATCGAGTGCCATGGGCGACATGGCCGGTGCCA
TCGGTTGCATTCGTCACCATGCCGAGTCCATCGACAAGCTCTATGGTGAAATCGCGCCCACCGGCGAGGAAAGCCTGGGG
CTGGTTCTGCGCGAGCCGCTGGGTGTGGTGGCGTCGATCGTGCCCTGGAACTTCCCGTTGATGATGACGGCCTGGAAGAT
CGGCCCGGCGCTGGCGGCTGGCAACAGTGTCATCCTCAAGCCGTCGGAAAAATCACCGCTTTCGGCGTTGCGCCTCGCCC
AGCTGACGCGCGAAGCCGGCTTGCCGCGCGGCGTTTTTCAGGTACTGCCCGGCTTCGGTCATACCGTGGGCAAGGCCTTG
GCATTGTCCATGGGGGTCGACTGTCTGGCCTTTACCGGCTCCACCGGGGTCGGCAAGCAATTGATGCAGTACGCCGGTCA
GTCGAATCTCAAGAAGGTCTTTCTGGAGTGTGGCGGCAAGAGTCCGAATCTCGTGTTCGCCGACTGCAAGGACCTGGATC
GCGTGGCCGAACACGCTGCTGCCGCGATCTTCCACAATCAGGGCGAGGTGTGCATCGCCGGCTCGCGCCTGCTGGTCGAG
AACAGCATTCGCGAGCGTTTCGTCGGCAAGGTGCTGGCCGCCGCCGAACGCATGCAGCCCGGCGACCCGTTGGATCCGGC
GAGCTTCATGGGCGCGATGGTCGATCAGACCCAGTATCAACGCGTACTCGACTACATCCGCCAGGGTGTCGAAGAAGGCG
CGACGCTACGTGCCGGCGGCCAGGCGCTGGATATCGAGGGGGCCAAGGGCCTGTTCATCGGGCCGACGGTATTCGATGGC
GTCACCGACACCATGGCCATCGGTCGGGAGGAAATATTCGGCCCGGTATTGGCGGTGTTCGGCTTCGACACCGAGGAGGA
GGCCGTACGTCTGGCCAACGACAGCGACTACGGCCTGGCGGCGGGCCTGTGGAGTCAGGACATCGATCGCATCATGCGCG
TCACCCGTCGGCTGCGCTCGGGCCAGGTCTTCGTCAACAACTGGGCCGATATGGATCAGACGGTGCCCTTCGGCGGGGTC
AAGCAGTCCGGCAACGGTCGCGACAAGTCCCACCATTCGCTGGAGGAATACTCCGATCTCAAGACCGTCTGGATGACGCT
CGCCACCTGA

Protein sequence :
MTHSTPSNPVTHADWQALAEHLTVEAGLEARAYIDDTFVDAADGATFTTLNPATGETLAEVASCDAADAETAVSVARRAF
ESGAWSRSSPGERKAVLLRLADLMEAHKHELALLDSLDMGKPVSSAMGDMAGAIGCIRHHAESIDKLYGEIAPTGEESLG
LVLREPLGVVASIVPWNFPLMMTAWKIGPALAAGNSVILKPSEKSPLSALRLAQLTREAGLPRGVFQVLPGFGHTVGKAL
ALSMGVDCLAFTGSTGVGKQLMQYAGQSNLKKVFLECGGKSPNLVFADCKDLDRVAEHAAAAIFHNQGEVCIAGSRLLVE
NSIRERFVGKVLAAAERMQPGDPLDPASFMGAMVDQTQYQRVLDYIRQGVEEGATLRAGGQALDIEGAKGLFIGPTVFDG
VTDTMAIGREEIFGPVLAVFGFDTEEEAVRLANDSDYGLAAGLWSQDIDRIMRVTRRLRSGQVFVNNWADMDQTVPFGGV
KQSGNGRDKSHHSLEEYSDLKTVWMTLAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-116 51
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-74 41
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 8e-71 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-75 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-75 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-75 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_1187 YP_573242.1 aldehyde dehydrogenase VFG0082 Protein 2e-74 41