Gene Information

Name : Csal_1041 (Csal_1041)
Accession : YP_573097.1
Strain : Chromohalobacter salexigens DSM 3043
Genome accession: NC_007963
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1170902 - 1171948 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCATTCCCCTGCCTTGACCACAGCCGTCGATCGCATCGTCGGGAACCGGGCGCTTCGTTATTCGAGCATGGTGGG
GCTTCTCGGACTGGTGCTGCTGGCCAGCATGGGCCTTTCCCTGCGCCTTGGCAGCTTTCCCACCTCGCTGCATGAAGTCG
GACAGGCATTGTTCGCCCCACAGGACAGCGAGATCGCCTTCATCGTCTGGGAGCTGCGCCTGCCGCGCATCCTGCTGGCC
GTGCTGGCGGGGGCGGCTCTGGCCGTGGCCGGCGCCATCCTGCAAGGCATCGTGCGCAATCCGCTGGCATCGCCGGACGT
GATCGGCATCACCAGCGGAGCCGCCATGGGCGCCGTCATCTTCCTGGCACTGTTCGGCACCACCCTAAGCGTGCACTGGC
TGCCGGCCGCCGCATTGCTGGGCGCCTTGCTGTCCGCTCTGCTGATGTTCTCGCTGGCCTGGAAGCACGGTATCACGCCC
ATGCGCATGGTACTGGTCGGTATCGGCCTCTCCGCCGCCGCGGGATCGGTGACGACCCTGCTGATCGTGATCAGCGACGA
TACCGCCGCCATGACGGCTTATGTATGGCTGACCGGCAGCCTCTACGCCGCTCAATGGCAGGATGTCCTCGGCATGCTGC
CATGGTTGCTGGTCACCGTCCCCTTGTGTCTGTCGCAGGCCCGCCACCTGAGTGTCATGGCGCTCGGAGATCACGTGGCT
CGAGGTCTGGGCGTGAACTTGCCCTGCTGTCGGCTGTTGCTGATGGGCTGCAGCGTGATACTGGCGGGCACGGCCGTGGC
TTTTGCCGGTGGCCTCGGCTTCGTGGGCCTGATCGCACCGCATATCGCCGCCCGCCTGGTGGGCCAGGACTTCCTGCGAC
GATTGCCCGTCACTGCCCTGGTCGGGGCGCTGATCGTCCTCCATGCCGATCTGCTGGGCCGCGTGGCCTTCCTGCCCAAG
GACCTGCCCGCCGGCATCTTCGTCTCGGGCGTGGGGGCGCCGTTTTTCGTCTACCTGTTGTATCGCCATCGCGATCACTC
ACGGTAG

Protein sequence : 
MTHSPALTTAVDRIVGNRALRYSSMVGLLGLVLLASMGLSLRLGSFPTSLHEVGQALFAPQDSEIAFIVWELRLPRILLA
VLAGAALAVAGAILQGIVRNPLASPDVIGITSGAAMGAVIFLALFGTTLSVHWLPAAALLGALLSALLMFSLAWKHGITP
MRMVLVGIGLSAAAGSVTTLLIVISDDTAAMTAYVWLTGSLYAAQWQDVLGMLPWLLVTVPLCLSQARHLSVMALGDHVA
RGLGVNLPCCRLLLMGCSVILAGTAVAFAGGLGFVGLIAPHIAARLVGQDFLRRLPVTALVGALIVLHADLLGRVAFLPK
DLPAGIFVSGVGAPFFVYLLYRHRDHSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ciuC YP_005681254.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-17 43
ciuC YP_005683345.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-17 43
ciuC YP_003783390.1 iron ABC transporter permease Virulence PiCp 4 Protein 2e-17 43
ciuC YP_005685431.1 Iron ABC transporter permease Virulence PiCp 4 Protein 2e-17 43
fecD AAL08452.1 FecD Virulence SRL Protein 2e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_1041 YP_573097.1 transport system permease BAC0163 Protein 1e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Csal_1041 YP_573097.1 transport system permease VFG1043 Protein 1e-13 42