Gene Information

Name : Nham_4261 (Nham_4261)
Accession : YP_571699.1
Strain :
Genome accession: NC_007959
Putative virulence/resistance : Unknown
Product : transposase, IS4
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 208201 - 209250 bp
Length : 1050 bp
Strand : +
Note : -

DNA sequence :
TTGGCTGAGATGGCAGCCGTGGTGCCTTGGGTCGCGCTCGAAGCTTTGATCGAGCCGCATTATCCCAAGGCTGGTCCGAG
TGGCGGTCGGCGACCATTTCCATTGGCCGTGATGCTACGGATTTATTGCTTGCAGCAGTGGTATAACCTCTCTGATCCCG
GCGCGGAAGAAGTCCTTTACGACATTTGCTCGATGCGCACGTTCGCGGGTCTGGAGCTCGGACGCGACACAATTCCCGAT
GAGACGACCATCTTGAACTTCCGGCATCTGCTGGAGCGTCACGAGTTGACGAAGGCGATATTCGTCGCGATTGCAGAGTT
TCTGGAGACTCGCGGTGCTCTGCTGCGTGGCGGCACCATCATCGACGCGACGCTGATCGCGGCATCGCCATCGACGAAGA
ACAAGGCACAGAAGCGCGACCCCGAGATGCGCTCATCGAAGAAGGGCAACCAGTGGTACTTTGGCATGAAGGCCCACATC
GGTGTCGATGCGACAAGCGGGCTCGTGCACACCGCAGGCGTGACCACAGGCAGTGTGCATGACGCCAAGGTCATGGACAA
TCTGATCCGCGAGGATGATCGTGCGGTGTATGGCGACAAGGGATATGCCAACGACCGCAAACAACGACAGGCGGAAGCAG
CGGGCGTTCTGTGGGCCGTGAAGGCGAAAGCGAAGCCCGGGCGCCCCCTGTCGATATCGCAACGCCGCCGCAATCGCCGC
TTCGGAAAAATCCGCGCCAAGGTCGAGCACGTGTTCCGGGTGATGAAATGCCAGTTCGGCTATCGCAAAGGTTCGCTATC
GCGGCATCGCCAAAAACGGCGCACAGGTCTTCGCGTTGCTCGCTCTCGCAAACCTATTCCTTGCCCGCAGGACACTTGCG
TCCGCTTGACAAAGTCGCCGGACGATTGCCGCCCGCGGCAGGTGCAAACAAAGAACCCTTCACCGCCAGCGCAAACCTGT
TGCGACTGCTTCAGAAAAAGTGACGTTGCTCAGAGGTTCCTTAGCATGGCAGCGCGCCGCTCGAGAGCTGAAGAACGCCG
CCGAACTTGA

Protein sequence :
MAEMAAVVPWVALEALIEPHYPKAGPSGGRRPFPLAVMLRIYCLQQWYNLSDPGAEEVLYDICSMRTFAGLELGRDTIPD
ETTILNFRHLLERHELTKAIFVAIAEFLETRGALLRGGTIIDATLIAASPSTKNKAQKRDPEMRSSKKGNQWYFGMKAHI
GVDATSGLVHTAGVTTGSVHDAKVMDNLIREDDRAVYGDKGYANDRKQRQAEAAGVLWAVKAKAKPGRPLSISQRRRNRR
FGKIRAKVEHVFRVMKCQFGYRKGSLSRHRQKRRTGLRVARSRKPIPCPQDTCVRLTKSPDDCRPRQVQTKNPSPPAQTC
CDCFRKSDVAQRFLSMAARRSRAEERRRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-63 52
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 7e-52 45
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 7e-52 45