Gene Information

Name : Nham_4149 (Nham_4149)
Accession : YP_571616.1
Strain :
Genome accession: NC_007959
Putative virulence/resistance : Unknown
Product : transposase, IS4
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 106313 - 107389 bp
Length : 1077 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCCAGCTGAGTTTCGCGTCGCTCGATTATGCGGCCAAGAAGAAGCGCACGAAGCGAGATGCGTTTTTGGCTGAGAT
GGCAGCCGTGGTGCCTTGGGTCGCGCTCGAAGCTTTGATCGAGCCGCATTATCCCAAGGCTGGTCCGAGTGGCGGTCGGC
GACCATTTCCATTGGCCGTGATGCTACGGATTTATTGCTTGCAGCAGTGGTATAACCTCTCTGATCCCGGCGCGGAAGAA
GTCCTTTACGACATTTGCTCGATGCGCACGTTCGCGGGTCTGGAGCTCGGACGCGACACAATTCCCGATGAGACGACCAT
CTTGAACTTCCGGCATCTGCTGGAGCGTCACGAGTTGACGAAGGCGATATTCGTCGCGATTGCAGAGTTTCTGGAGACTC
GCGGTGCTCTGCTGCGTGGCGGCACCATCATCGACGCGACGCTGATCGCGGCATCGCCATCGACGAAGAACAAGGCACAG
AAGCGCGACCCCGAGATGCGCTCATCGAAGAAGGGCAACCAGTGGTACTTTGGCATGAAGGCCCACATCGGTGTCGATGC
GACAAGCGGGCTCGTGCACACCGCAGGCGTGACCACAGGCAGTGTGCATGACGCCAAGGTCATGGACAATCTGATCCGCG
AGGATGATCGTGCGGTGTATGGCGACAAGGGATATGCCAACGACCGCAAACAACGACAGGCGGAAGCAGCGGGCGTTCTG
TGGGCCGTGAAGGCGAAAGCGAAGCCCGGGCGCCCCCTGTCGATATCGCAACGCCGCCGCAATCGCCGCTTCGGAAAAAT
CCGCGCCAAGGTCGAGCACGTGTTCCGGGTGATGAAATGCCAGTTCGGCTATCGCAAAGGTTCGCTATCGCGGCATCGCC
AAAAACGGCGCACAGGTCTTCGCGTTGCTCGCTCTCGCAAACCTATTCCTTGCCCGCAGGACACTTGCGTCCGCTTGACA
AAGTCGCCGGACGATTGCCGCCCGCGGCAGGTGCAAACAAAGAACCCTTCACCGCCAGCGCAAACCTGTTGCGACTGCTT
CAGAAAAAGTGACGTTGCTCAGAGGTTCCTTAGCTAG

Protein sequence : 
MAQLSFASLDYAAKKKRTKRDAFLAEMAAVVPWVALEALIEPHYPKAGPSGGRRPFPLAVMLRIYCLQQWYNLSDPGAEE
VLYDICSMRTFAGLELGRDTIPDETTILNFRHLLERHELTKAIFVAIAEFLETRGALLRGGTIIDATLIAASPSTKNKAQ
KRDPEMRSSKKGNQWYFGMKAHIGVDATSGLVHTAGVTTGSVHDAKVMDNLIREDDRAVYGDKGYANDRKQRQAEAAGVL
WAVKAKAKPGRPLSISQRRRNRRFGKIRAKVEHVFRVMKCQFGYRKGSLSRHRQKRRTGLRVARSRKPIPCPQDTCVRLT
KSPDDCRPRQVQTKNPSPPAQTCCDCFRKSDVAQRFLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 1e-70 52
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 1e-53 44
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 1e-53 44