|
Name : RPD_0893 (RPD_0893) Accession : YP_568032.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1005874 - 1006575 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGGGTGCGCGCATTCTGGTAGTTGAAGACGAGGAAGCGCTGACCACGCTGCTGCGTTACAATCTCGAATCCGACGGCTA CGACGTCGAAACGGTCGCGCGCGGCGATGACGCCGACACGCGGATGAAAGAGCGGCTTCCTGATCTGGTGGTGCTGGACT GGATGCTGCCGGGGCTGTCGGGGATCGAGCTGTGCCGCAGGCTGCGGGCGCGGTCCGATACCAAGCAGTTGCCGATCATC ATGCTGACCGCGCGCGGCGAGGAGAGCGAGCGCGTCCGCGGGCTCGCCACCGGCGCCGACGATTACATCGTCAAGCCGTT CTCGGTGCCGGAATTGCTGGCGCGGGTGAAGGGCCTGCTGCGGCGTGCGGCGCCTGAGCGGCTGGCAACCGTGCTGACTT ACGGCGATCTCGAACTCGACCGCGACAAGCGCCGCGTCGCGCGCTCCGGCCGGCCGATCGATCTCGGCCCGACCGAATAT CGCCTGCTCGAATTCTTCCTCGAACATCCCGGCCGGGTGTTCAGCCGCGAGCAGTTGCTCGACGGCGTCTGGGGGCGCGA TATCTATATCGATGAGCGCACCGTCGACGTTCACATCGGCCGCCTGCGCAAGCTGCTCAATCCGGGCCGCGAGCAGGACC CGATCCGCACCGTCCGCGGCGCCGGCTACGCACTGGATGATCGCTTCGCCAAGGCGGAGTAG Protein sequence : MGARILVVEDEEALTTLLRYNLESDGYDVETVARGDDADTRMKERLPDLVVLDWMLPGLSGIELCRRLRARSDTKQLPII MLTARGEESERVRGLATGADDYIVKPFSVPELLARVKGLLRRAAPERLATVLTYGDLELDRDKRRVARSGRPIDLGPTEY RLLEFFLEHPGRVFSREQLLDGVWGRDIYIDERTVDVHIGRLRKLLNPGREQDPIRTVRGAGYALDDRFAKAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-34 | 43 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 1e-34 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 6e-35 | 45 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_010400.5986590.p0 | Protein | 1e-36 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_011595.7057856.p0 | Protein | 2e-37 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_010410.6002989.p0 | Protein | 2e-37 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | CP000034.1.gene2186. | Protein | 2e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | CP001918.1.gene3444. | Protein | 1e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | BAC0596 | Protein | 2e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | BAC0039 | Protein | 2e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_002695.1.916589.p | Protein | 1e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | CP001138.1.gene2239. | Protein | 2e-34 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 7e-42 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | HE999704.1.gene2815. | Protein | 2e-38 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 4e-34 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 7e-42 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 1e-41 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | CP000647.1.gene2531. | Protein | 8e-35 | 42 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | HE999704.1.gene1528. | Protein | 5e-31 | 41 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | CP004022.1.gene1676. | Protein | 1e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 3e-39 | 45 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | VFG1563 | Protein | 9e-35 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | VFG1702 | Protein | 4e-35 | 43 |
| RPD_0893 | YP_568032.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 2e-30 | 42 |
