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Name : RPD_0760 (RPD_0760) Accession : YP_567899.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 851365 - 852099 bp Length : 735 bp Strand : - Note : - DNA sequence : GTGTTCGAGGAGAACTTCGCCGTCTACGGCGTGCGCAAGGTCTGGCGGCAGCTGAAGCGCGAGGGCTTCCACGTCGCGCG CTGCACAGTAGCTCGGTTGATGCGGCAGATGGGCTTGCAAGGTGTTATCCGCGGCAAATCCATCAAGACCACGATCAGCG ACAAGGCCGCGCCGTGTCCGCTCGATCACGTCAACCGCCAGTTCAAGGCGCCCAGACCGAATGTCCTGTGGTTGTCCGAC TTCACCTACGTCGCGACCTGGACCGGCTTCGTCTACGTCGCCTTCGTGATCGACGCCTATGCCCGCCGGATCGTCGGCCG GCGGGCCTCACGAACGGCGCATGCCGGCTTCGTGTTCGATGCGTTGGAGCAAGCTCTGCATGATCGGCGGCCGGTCCATC GCGGCGGCCTGGTCCACCATAGCGATCGGGGCAGCCAATACGTCTCGATCAAATACACCGAACGCCTGGCCGAAGCGGGC ATCGAACCTTCCGTCGGCAGCGTCGGCGATTCCTACGACAATGCCCTCGCCGAAACCATCAACGGGCTCTACAAAGCCGA GGTGATCCATCGGCGCGGGCCATGGCGCAGCTTCGAGGCCGTCGAATTCGCCACCCTCGAATGGGTCGACTGGTTCAACA ACCGAAGGCTCCTGGAGCCCATCGGTAACATTCCGCCCGCGGAAGCCGAGCAACGCTACTACGCTATGCTGGAACGACCG GCCATGGCGGCGTAG Protein sequence : MFEENFAVYGVRKVWRQLKREGFHVARCTVARLMRQMGLQGVIRGKSIKTTISDKAAPCPLDHVNRQFKAPRPNVLWLSD FTYVATWTGFVYVAFVIDAYARRIVGRRASRTAHAGFVFDALEQALHDRRPVHRGGLVHHSDRGSQYVSIKYTERLAEAG IEPSVGSVGDSYDNALAETINGLYKAEVIHRRGPWRSFEAVEFATLEWVDWFNNRRLLEPIGNIPPAEAEQRYYAMLERP AMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 2e-61 | 65 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-70 | 65 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-69 | 65 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 8e-70 | 65 |
| tnpC | AAD44736.1 | TnpC | Not tested | SHI-2 | Protein | 1e-57 | 64 |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 5e-61 | 64 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-68 | 64 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 1e-68 | 64 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 5e-69 | 64 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 5e-68 | 64 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-68 | 64 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 4e-69 | 64 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 7e-69 | 64 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 7e-69 | 64 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 5e-69 | 64 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 3e-69 | 64 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 2e-69 | 64 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-69 | 64 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-69 | 64 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-69 | 64 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-66 | 62 |
| c3594 | NP_755469.1 | transposase | Not tested | PAI I CFT073 | Protein | 5e-46 | 60 |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 1e-47 | 51 |
| CDCE8392_1774 | YP_005134308.1 | transposase-like protein | Not tested | Not named | Protein | 3e-33 | 50 |
| CDCE8392_1958 | YP_005134489.1 | transposase-like protein | Not tested | Not named | Protein | 8e-32 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPD_0760 | YP_567899.1 | integrase catalytic subunit | VFG1602 | Protein | 1e-66 | 62 |
| RPD_0760 | YP_567899.1 | integrase catalytic subunit | VFG1715 | Protein | 2e-46 | 60 |
