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Name : RPD_0663 (RPD_0663) Accession : YP_567802.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 746532 - 748655 bp Length : 2124 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGTCAGCTGTCAAAACAACCAGGCGGACCACGGGATCGGCGATGCTCGATCCTGCGATCGTGATCCCCGCGATCGGATC CGCGTTCGTCAAACTTGATCCGCGCGCGATGATCAAGAATCCGGTGATGTTCGTCGTCGAGGTGGTCGCCGCTCTGACCA CCGCGATCTTCATCAAGTCGATCGTCACCGACGGCGGCGGCGACGGCTTCGGTTTCACGCTGCAGATCATCCTGTGGCTG TGGTTCACGGTGCTGTTCGCCAATTTCGCCGAAGCGGTGGCGGAAGGTCGCGGCAAGGCACAGGCGGACACGCTGCGCCA GACCATGACCAATACCAAGGCGAAGAAGCTGCTGATGGAGGGCAACTACGAACTCTATGAGGGCGTGCCCGCCGAGAATC TGGAGCAAGGCGATTTGGTGCTGGTCGAGGCCGGCGACCTGATCCCGAGCGACGGTGAAATCATCCACGGCGTCGCCTCG GTTAACGAAGCCGCCATCACCGGCGAATCCGCTCCGGTGATCCGCGAATCCGGCGGCGACCGGTCGGCCGTCACCGGCGG CACCATGGTCATCTCGGATCGCATCGTGGTGCGGATCACCGCGGCCAAGGGCAACTCGTTCCTCGACCGCATGATCAAGC TCGTCGAAGGCGCGGCGCGTCAGAAGACTCCGAACGAGATCGCGCTCAACATCCTGCTCGCCGGGCTCACGATCATCTTC GTGTTCGCGACGGTGACGATTCCGAGCTATGCGGCCTATGCCGGCGGACAGATTTCGGTCGTCGTGCTGGCGGCGTTGTT CGTGACCCTGATCCCGACCACGATCGGCGCCTTGCTGTCGGCGATCGGTATCGCCGGCATGGACCGTCTGGTGCGCTTCA ATGTGCTGGCGATGTCCGGCCGGGCGGTCGAGGCCGCCGGCGACGTCGATACGCTGCTGCTCGACAAGACCGGCACCATC ACGCTCGGCAACCGGCAGGCCACCGCCTTCCGGCCGGTGACCGGTGTCAGCGAGGAAGCGCTGGCGGATGCGGCGCAGCT CGCGTCGTTGGCCGACGAAACGCCCGAAGGCCGTTCGATCGTGGTGCTGGCGAAGGAGAAATACGGTCTTCGCGGACGCG ACCTCGCGGAACTGTCGGCGACCTTCGTCCCGTTCACCGCGCAGACCCGCATGAGCGGCGTCGACGCCGGCCACTCATCG GTCCGCAAGGGCGCCGTCGACGCGATCCTGAACTACGTCAACGGCGGCGGAAGCCGTGCGGTCGCGTCCGGCAATGCGGT GCGCGCCCTGCATCCGGGCATGTCCGACGCCGCCCGCGAAATCTCCGCGATCGCCGACGAAGTCGCCAAAGCGGGCGGCA CGCCGCTCGCCGTGGCGAAGGATGGTCGTCTGCTCGGCGTGGTGCACTTGAAGGACATCGTCAAGGGCGGCATCCGCGAG CGTTTCGCCGAGCTGCGCCGGATGGGCATCCGCACCGTGATGATCACCGGCGACAATCCGATGACCGCGGCGGCGATCGC CGCCGAAGCCGGGGTCGATGACTTCCTGGCGCAAGCGACGCCTGAGGACAAGCTGAAGCTGATTCGCGACGAGCAGGCCA AAGGCAAGCTGGTGGCGATGTGCGGCGACGGCACCAACGACGCGCCCGCGCTCGCTCAAGCCGACGTCGGCGTCGCCATG AACACCGGCACGCAGGCGGCGCGCGAGGCCGGCAACATGGTCGACCTCGATTCCAACCCGACCAAGCTGATCGAGGTGGT CGAAATCGGCAAGCAGTTGCTGATGACCCGCGGCGCGCTGACTACGTTCTCGATCGCGAACGACGTCGCCAAGTACTTCG CCATCATTCCGGCGATGTTCCTGGCGTTCTATCCGCAACTCGGCGTGCTCAACGTGATGCAGCTGGAAAGCCCGCAAAGC GCCATTCTCTCGGCGATCATCTTCAACGCGCTGATCATCATCGCGCTGATCCCGCTGTCGCTGAAGGGCGTGGCCTACCG GGCCGTCGGCGCCGGCGCATTGCTGCGGCGAAATCTGCTGATCTACGGGCTCGGCGGCATCGTCATTCCGTTCGCCGGCA TCAAGGCGATCGACCTTGCGATCACCGCCTTGCATCTCGTCTGA Protein sequence : MSAVKTTRRTTGSAMLDPAIVIPAIGSAFVKLDPRAMIKNPVMFVVEVVAALTTAIFIKSIVTDGGGDGFGFTLQIILWL WFTVLFANFAEAVAEGRGKAQADTLRQTMTNTKAKKLLMEGNYELYEGVPAENLEQGDLVLVEAGDLIPSDGEIIHGVAS VNEAAITGESAPVIRESGGDRSAVTGGTMVISDRIVVRITAAKGNSFLDRMIKLVEGAARQKTPNEIALNILLAGLTIIF VFATVTIPSYAAYAGGQISVVVLAALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTI TLGNRQATAFRPVTGVSEEALADAAQLASLADETPEGRSIVVLAKEKYGLRGRDLAELSATFVPFTAQTRMSGVDAGHSS VRKGAVDAILNYVNGGGSRAVASGNAVRALHPGMSDAAREISAIADEVAKAGGTPLAVAKDGRLLGVVHLKDIVKGGIRE RFAELRRMGIRTVMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLKLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAM NTGTQAAREAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLGVLNVMQLESPQS AILSAIIFNALIIIALIPLSLKGVAYRAVGAGALLRRNLLIYGLGGIVIPFAGIKAIDLAITALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-164 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-164 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-139 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-137 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-138 | 54 |
