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Name : RPD_0049 (RPD_0049) Accession : YP_567190.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Virulence Product : betaine-aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 61605 - 63122 bp Length : 1518 bp Strand : - Note : - DNA sequence : ATGACGACGAAGACCACCAAGAAGCCGGAGCCGAGCCGGGACGACTGGCACGAGCGCGGCCTGAAGGTCACGCCACGCAA TCAGCTCTATATCGATGGCGGCTGGCAGCCGGCTGCGTCCGGCGGCACCTTTGCGTGTATCAGCCCGATCGACGGCCGGA CCATCACCGACGTCGCCGCCGGCGATGCCGAGGATATCGATCGTGCGGTCAAGGCGGCCCGCACGGCGTTCGAGAGCGGG GTCTGGTCGCGCCAGACCCCGGCCCAGCGCAAGAAAGTGCTGTTGCAATTCGCAAAGCTGGTGCGCGAGCATCGCGACGA ACTCGCTTTGCTCGAAACGCTCGATGTCGGAAAGCCGATCCGTTTCTCGCGCGCCGTGGACATTCCTCAGGTCGAAGAGG CCATCAGCTGGACCGCCGAGGCGATCGACAAGCTGTATGACGAGGTCGCCCCGACGGGTGACAAGTCGCTGGCTCTGGTG CGCCGCGAAGCCGTCGGCGTGGTCGGCGCGGTGGTGCCGTGGAATTTTCCGCTGCTGATGGCGGCGTGGAAGTTCGCGCC GATTCTGGCCACCGGCAACAGCCTCGTGCTGAAGCCGGCCGAGCAATCGCCGCTGACCGCGCTGCGGGTCGCCGAGCTTG CGACCGAAGCCGGGATTCCGAACGGCGTCTTCAATGTCGTGACCGGCTTCGGCGAGACCGCGGGCAAGGCGCTCGGCCTG CACCCGGATGTCGACGTGCTGGCATTCACCGGCTCGACGCAGGTCGGCAAGTACTTCCTCGGCTATTCGGCGCAGTCGAA CATGAAGCAGGTCTGGCTCGAATGCGGTGGCAAGAGCCCGAACATCATCTTCGATGACGTCTACGACATCGACGCCGCCG TGAAGGCCGCGGCGATGGGGATCTTCTTCAACCAGGGGCAGGTCTGCAATGCCGGCTCGCGGTTGCTGGTCCACAAGGCC GTCAAGGCGCAGTTCATGGAGAAGCTGGTCGCCTTCACCAAGCGTATGACGCCGGCGGACCCGATGGACCCGGCGACGAT TCTCGGCTCGATCGTGAGCGTCGAACAGGCGCGCCGCATTCTCGACTACATCGAGATCGGCGCCGGCGAGGGCGCCAGAC TGGTAGCGGGCGGCAAGCCGGTGCAGCCGGTCGAAGGCGGCTGCTTTATCGAACCGACCATTTTCGATGGCGTCGGTGCG GCGATGCGGATCGCGCAGGAAGAGATCTTCGGCCCGGTGCTGTCGGTGATCGAGTTCGAGAGCGACGACGAAGCGATCAG TATCGCCAATGACTCGATGTACGGCCTCGCAGCCGCGGTCTGGACGCGCGATCTCAACCGGGCGCACCGGATGGGCCAGC GTCTGAAAGCTGGGCTGGTCTGGGTGAACTGCTACGACGCCGGCGACATGACCGTGCCGTTCGGCGGCGTGAAGCAGTCT GGCTTTGGTCGCGATCGATCTCTCCACGCTTTGGAGAAGTACACCCAGCTCAAGACCGTCTGGATCAATCTGCGCTGA Protein sequence : MTTKTTKKPEPSRDDWHERGLKVTPRNQLYIDGGWQPAASGGTFACISPIDGRTITDVAAGDAEDIDRAVKAARTAFESG VWSRQTPAQRKKVLLQFAKLVREHRDELALLETLDVGKPIRFSRAVDIPQVEEAISWTAEAIDKLYDEVAPTGDKSLALV RREAVGVVGAVVPWNFPLLMAAWKFAPILATGNSLVLKPAEQSPLTALRVAELATEAGIPNGVFNVVTGFGETAGKALGL HPDVDVLAFTGSTQVGKYFLGYSAQSNMKQVWLECGGKSPNIIFDDVYDIDAAVKAAAMGIFFNQGQVCNAGSRLLVHKA VKAQFMEKLVAFTKRMTPADPMDPATILGSIVSVEQARRILDYIEIGAGEGARLVAGGKPVQPVEGGCFIEPTIFDGVGA AMRIAQEEIFGPVLSVIEFESDDEAISIANDSMYGLAAAVWTRDLNRAHRMGQRLKAGLVWVNCYDAGDMTVPFGGVKQS GFGRDRSLHALEKYTQLKTVWINLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-119 | 56 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-77 | 43 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-80 | 43 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-80 | 43 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-80 | 43 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPD_0049 | YP_567190.1 | betaine-aldehyde dehydrogenase | VFG0082 | Protein | 7e-78 | 43 |
