Gene Information

Name : RPD_4396 (RPD_4396)
Accession : YP_571513.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4863385 - 4864152 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
TTGGTCCGACGCCGCGCAGCCCGCGCAATGTGGCCGCGGCACGCAGCAACACGATCCCGCGCGGCCTCTGCGAGTTCACG
CCATGACGCGCCGCGCCCTTCGGATCATCGTCTGATGCTGACCGTTTCGGGTCTGACCAAATCCTATCGCTCGGGACAGG
ACAGCGTCGCCGTACTGCGCGGCGTCGACCTCGCGCTCGCCGCCGGCGAAAGCGTCGCGCTGACCGGCGAATCCGGCAGC
GGCAAAAGCACGCTGCTGCATCTGATCGCCGGCCTCGATCAGCCCGACCAGGGCGAGATCAACTATGGCGACGTGACGAT
TTCGCGCCTCACCGACGCCGAGCGCGCCGCATTCCGGCGCGAACGTCTCGGCCTGGTGTTCCAGCAGTTCAACCTGATCC
CGAGCCTCACCGTCGCCGACAATCTCGCCTTCCAGTCGCGGCTCGCCGGCCGCCATGACGCCGCGTGGCATAGCGAACTG
ATCGAGCGGCTGGGCCTCGGCCGTCTGCTGAAGCGCTATCCGGAGCAACTTTCCGGCGGCCAGCAGCAGCGCGTCGCGAT
CGGCCGCGCGCTCGCGGTCAAGCCGACGCTGCTGCTCGCCGACGAACCGACCGGCAATCTCGACGAGGCCACCGCCGACG
ACGTGCTGGCGCTGGCCAACGATCTGGTCCGCCGCACCGGCTGCGGCTTCCTGATGGTGACGCACAGCGAACGCCTCGCC
GCGACGCTCGACCGACGTGTCAACCTTCATGCGGGGCTGATCCATTGA

Protein sequence : 
MVRRRAARAMWPRHAATRSRAASASSRHDAPRPSDHRLMLTVSGLTKSYRSGQDSVAVLRGVDLALAAGESVALTGESGS
GKSTLLHLIAGLDQPDQGEINYGDVTISRLTDAERAAFRRERLGLVFQQFNLIPSLTVADNLAFQSRLAGRHDAAWHSEL
IERLGLGRLLKRYPEQLSGGQQQRVAIGRALAVKPTLLLADEPTGNLDEATADDVLALANDLVRRTGCGFLMVTHSERLA
ATLDRRVNLHAGLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_4396 YP_571513.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-28 42
RPD_4396 YP_571513.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-35 41