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Name : RPD_4312 (RPD_4312) Accession : YP_571430.1 Strain : Rhodopseudomonas palustris BisB5 Genome accession: NC_007958 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 4778772 - 4780760 bp Length : 1989 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGCGAAGGTCGATCATTCCCGTATGGCGAACGCAATCCGGGCGCTGGCGATGGACGCGGTCGAGAAGGCCAAATCCGG CCACCCCGGCCTGCCGATGGGCGCCGCCGACGTCGCCACCGTACTGTTCACCGACTTCCTGAAATTCGATGCCGCCGATC CGCACTGGCCGGATCGCGACCGCTTCATCCTCTCCGCCGGCCACGGCTCGATGCTGCTCTACGCACTGCTGTACCTCACC GGCAATTCGGAGCTGACGCTCGACCAGATCAAGGCATTCCGCCAGCTCGACTCCCGGACGCCGGGACATCCGGAAAACTG CATCACCGATTCGGTCGAAACTACCACCGGCCCGCTCGGCCAGGGCGTCGCGTCGTCGGTGGGCACCGCGCTGGCGGAGC GGCTGCTGGCTGCGGAGTTCGGCGAGATCGTCGATCACTACACCTATGTGCTGTGCTCGGACGGCGATCTGATGGAAGGC GTCAGCCACGAAGCACTGGCGCTGGCCGGCCATCTCAAGCTGTCGAAGCTGATCTTCCTCTACGACGACAACGGCATCTC GATCGACGGGCCGCTGACACTGACCGACAATGTCGACCAGGTCGCGCGCTTCCAGGCGCATGGCTGGAATGCGATGCGGA TCGACGGCCACGATCACACCGCGATCGCCGCGGCGATCAAGGCGGCGCAGGCGTCCGACCGGCCGACCATGATCGCCTGC AAGACCACGATCGGCTTCGGCGCCCCGACCCGGGCGGGCACGTCCAAGGCGCATGGCGAGCCGCTCGGCGCAGAAGAACT GGCCGGCGCCAAGAAGGCGCTGGGCTGGGATTACGGCCCGTTCGAAATCCCGGACGACGTGCTGTCGGCGTGGCGCGCGG TCGGCAGCAAGGGCGCCAAGGCCCATGCCGCGTGGCAGACGAAACTCGACGCGATGGACAAGGATCTCCGCGCGGAATTC CAGCGCCGGGTGATCGACCGCAAGCGCCCGGCCGCGCTCGACGGCGCGATCCGAAAACTCAAGGACAGGCTGGTCGACGA GCCGCAGACCATCGCCACCCGCAAGGCCAGCGAACTGGCGCTGGAGGCGATCGTCGAGGTGGTGCCGGAAATGCTGCTCG GCTCGGCCGATCTCACGCCCTCCAACAATACCCGCACCAAACACGCCAAGGACGTCACGCCAGAGGATTTCTCGGGCCGT TACATCCATTACGGCATCCGCGAAATGGGCATGGCGGCGGCGATGAACGGCATCGCGATGCATGGCGGCTTCGCGCCGGC CGGCGGCACCTTCCTGTGCTTCGCCGACTACGCCCGCCCCTCGATGCGGATCGCGGCGCTGTCACACGTGCCGGTGGTCT ACATCATGACCCACGACTCGATCGGCCTCGGCGAAGACGGCCCGACCCATCAGCCGGTCGAGCACCTCGCCTCGTTGCGC GCGATGCCGAACATGCGGGTATTCCGCCCGGCCGATCCGGTCGAGACCGCGGAGTGCTGGCAGCTCGCGCTCGAGAACAC CGGCGGCCCGACGGTGCTGGCGCTGTCGCGGCAGAATCTCACGCCGGTGCGTACCAGCAAGTCGGACGACAACCGCTGCG CCAAGGGCGGCTATGAGCTGATCGCCGCCAAGGGCAACGCCAGCGTGTCGATCTTCGCCACCGGCTCCGAGGTCGAGATC GCGGTCGCCGCGCACAAATTGCTGGCCGACAAGGGCATCAGTGCCCGCGTGGTGTCGGTGCCGTCGCTCGATCTGCTGCT GCTGCAGGACGACGCGACCCGCAAGGGGATCATCGGCGATGCGCCGGTCAAGGTCGCGGTCGAGGCCGCGGTGCGGTTCG GTTGGGACGCGGTGATCGGCCCGGACGGCGGCTTCATCGGGATGTCGGGCTTCGGCGCCAGCGCTCCGGCGAAAGACCTC TACAAGCATTTCGGCATCACCGCCGAAGCTGTCGCGGAGGCTGCGTCAAGCCGCCTCGGGGGCAAGTAA Protein sequence : MAKVDHSRMANAIRALAMDAVEKAKSGHPGLPMGAADVATVLFTDFLKFDAADPHWPDRDRFILSAGHGSMLLYALLYLT GNSELTLDQIKAFRQLDSRTPGHPENCITDSVETTTGPLGQGVASSVGTALAERLLAAEFGEIVDHYTYVLCSDGDLMEG VSHEALALAGHLKLSKLIFLYDDNGISIDGPLTLTDNVDQVARFQAHGWNAMRIDGHDHTAIAAAIKAAQASDRPTMIAC KTTIGFGAPTRAGTSKAHGEPLGAEELAGAKKALGWDYGPFEIPDDVLSAWRAVGSKGAKAHAAWQTKLDAMDKDLRAEF QRRVIDRKRPAALDGAIRKLKDRLVDEPQTIATRKASELALEAIVEVVPEMLLGSADLTPSNNTRTKHAKDVTPEDFSGR YIHYGIREMGMAAAMNGIAMHGGFAPAGGTFLCFADYARPSMRIAALSHVPVVYIMTHDSIGLGEDGPTHQPVEHLASLR AMPNMRVFRPADPVETAECWQLALENTGGPTVLALSRQNLTPVRTSKSDDNRCAKGGYELIAAKGNASVSIFATGSEVEI AVAAHKLLADKGISARVVSVPSLDLLLLQDDATRKGIIGDAPVKVAVEAAVRFGWDAVIGPDGGFIGMSGFGASAPAKDL YKHFGITAEAVAEAASSRLGGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-139 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 8e-128 | 49 |
