Gene Information

Name : RPD_4243 (RPD_4243)
Accession : YP_571361.1
Strain : Rhodopseudomonas palustris BisB5
Genome accession: NC_007958
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4711372 - 4712031 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAATCCTGGTGGTCGAAGACGACGCGATGATCGCGGATGGCATTCGCGCCGGCCTGGCGCTCGCCGGCGCGAGCAT
CGATTGCGTCGCGAACTGCGAGGATGCCGTCACGGCGCTCTCCGCAAACAGCTTTTCCGCCGTGGTTCTCGACATCATGC
TGCCCGACGGCAGCGGCATCGATCTGCTACGCAAGCTGCGCGCCGGCGGTGACACGACCCCGGTGCTGCTGCTGACCGCG
CTCGACGAGGTCGGCGATCGGATCGCGGGGCTCGACTCCGGCGCGGACGATTATCTCGGCAAGCCGTTCGATCTCGACGA
ACTCGGCGCGCGGCTGCGCGCGATCATTCGCCGCCGCGACGGCCGGGCAGCGACCTGCCTCGAGCACGGCGCGATCCGTC
TGTTTCCCGCCGATCGCAACGCCACGCTGGAAGGCGCGCCGGTGCCGCTGTCGCGCCGCGAATTCGCGGTGCTGCACGCG
CTGATGGAGCGGCCCGGAGTGGTGCGCTCGCGCGGCGAACTCGAGGAGCGGCTGTACGGCTGGGGCGACGAAATCGAAAG
CAACGCCGTGGAAGTCCACATTCACAACCTCCGCGCCAAGCTCGGACGCGCCGCGATCGAGACCATCCGCGGCATCGGCT
ATCGGATGAAACCGCTATGA

Protein sequence : 
MRILVVEDDAMIADGIRAGLALAGASIDCVANCEDAVTALSANSFSAVVLDIMLPDGSGIDLLRKLRAGGDTTPVLLLTA
LDEVGDRIAGLDSGADDYLGKPFDLDELGARLRAIIRRRDGRAATCLEHGAIRLFPADRNATLEGAPVPLSRREFAVLHA
LMERPGVVRSRGELEERLYGWGDEIESNAVEVHIHNLRAKLGRAAIETIRGIGYRMKPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-34 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_4243 YP_571361.1 response regulator receiver BAC0487 Protein 7e-33 43
RPD_4243 YP_571361.1 response regulator receiver Y16952.3.orf35.gene. Protein 7e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPD_4243 YP_571361.1 response regulator receiver VFG0473 Protein 1e-31 42